Gene ECD_03886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03886 
SymbolaceB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4123363 
End bp4124964 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content52% 
IMG OID 
Productmalate synthase 
Protein accessionACT45678 
Protein GI253980008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.836126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC AGGCAACAAC AACCGATGAA CTGGCTTTCA CAAGGCCGTA TGGCGAGCAG 
GAGAAGCAAA TTCTTACTGC CGAAGCGGTA GAATTTCTGA CTGAGCTGGT GACGCATTTT
ACGCCACAAC GCAATAAACT TCTGGCAGCG CGCATTCAGC AGCAGCAAGA TATTGATAAC
GGAACGTTGC CTGATTTTAT TTCGGAAACA GCTTCCATTC GCAATGCTGA TTGGAAAATT
CGCGGGATTC CTGCGGACTT AGAAGACCGC CGCGTAGAGA TAACTGGCCC GGTAGAGCGC
AAGATGGTGA TCAACGCGCT CAACGCCAAT GTGAAAGTCT TTATGGCCGA TTTCGAAGAT
TCACTGGCAC CAGACTGGAA CAAAGTGATC GACGGGCAAA TTAACCTGCG TGATGCGGTT
AACGGCACCA TCAGTTACAC TAATGAAGCA GGCAAAATTT ACCAGCTCAA GCCCAATCCA
GCGGTTTTGA TTTGTCGGGT ACGCGGTCTG CACTTGCCGG AAAAACATGT CACCTGGCGT
GGTGAGGCAA TCCCCGGCAG CCTGTTTGAT TTTGCGCTCT ATTTCTTCCA CAACTATCAG
GCACTGTTGG CAAAGGGCAG TGGTCCCTAT TTCTATCTGC CGAAAACCCA GTCCTGGCAG
GAAGCGGCCT GGTGGAGCGA AGTCTTCAGC TATGCAGAAG ATCGCTTTAA TCTGCCGCGC
GGCACCATCA AGGCGACGTT GCTGATTGAA ACGCTGCCCG CCGTGTTCCA GATGGATGAA
ATCCTTCACG CGCTGCGTGA CCATATTGTT GGTCTGAACT GCGGTCGTTG GGATTACATC
TTCAGCTATA TCAAAACGTT GAAAAACTAT CCCGATCGCG TCCTGCCAGA CAGACAGGCA
GTGACGATGG ATAAACCATT CCTGAATGCT TACTCACGCC TGTTGATTAA AACCTGCCAT
AAACGCGGTG CTTTTGCGAT GGGCGGCATG GCGGCGTTTA TTCCGAGCAA AGATGAAGAG
CACAATAACC AGGTGCTCAA CAAAGTAAAA GCGGATAAAT CGCTGGAAGC CAATAACGGT
CACGATGGCA CATGGATCGC TCACCCAGGC CTTGCGGACA CGGCAATGGC GGTATTCAAC
GACATTCTCG GCTCCCGTAA AAATCAGCTT GAAGTGATGC GCGAACAAGA CGCGCCGATT
ACTGCCGATC AGCTGCTGGC ACCTTGTGAT GGTGAACGCA CCGAAGAAGG TATGCGCGCC
AACATTCGCG TGGCTGTGCA GTACATCGAA GCGTGGATCT CTGGCAACGG CTGTGTGCCG
ATTTATGGCC TGATGGAAGA TGCGGCGACG GCTGAAATTT CCCGTACCTC GATCTGGCAG
TGGATCCATC ATCAAAAAAC GTTGAGCAAT GGCAAACCGG TGACCAAAGC CTTGTTCCGC
CAGATGCTGG GCGAAGAGAT GAAAGTCATT GCCAGCGAAC TGGGCGAAGA ACGTTTCTCC
CAGGGGCGTT TTGACGATGC CGCACGCTTG ATGGAACAGA TCACCACTTC CGATGAGTTA
ATTGATTTCC TGACCCTGCC AGGCTACCGC CTGTTAGCGT AA
 
Protein sequence
MTEQATTTDE LAFTRPYGEQ EKQILTAEAV EFLTELVTHF TPQRNKLLAA RIQQQQDIDN 
GTLPDFISET ASIRNADWKI RGIPADLEDR RVEITGPVER KMVINALNAN VKVFMADFED
SLAPDWNKVI DGQINLRDAV NGTISYTNEA GKIYQLKPNP AVLICRVRGL HLPEKHVTWR
GEAIPGSLFD FALYFFHNYQ ALLAKGSGPY FYLPKTQSWQ EAAWWSEVFS YAEDRFNLPR
GTIKATLLIE TLPAVFQMDE ILHALRDHIV GLNCGRWDYI FSYIKTLKNY PDRVLPDRQA
VTMDKPFLNA YSRLLIKTCH KRGAFAMGGM AAFIPSKDEE HNNQVLNKVK ADKSLEANNG
HDGTWIAHPG LADTAMAVFN DILGSRKNQL EVMREQDAPI TADQLLAPCD GERTEEGMRA
NIRVAVQYIE AWISGNGCVP IYGLMEDAAT AEISRTSIWQ WIHHQKTLSN GKPVTKALFR
QMLGEEMKVI ASELGEERFS QGRFDDAARL MEQITTSDEL IDFLTLPGYR LLA