Gene ECD_03840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03840 
SymbolyijP 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4057079 
End bp4058812 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content50% 
IMG OID 
Productconserved inner membrane protein 
Protein accessionACT45633 
Protein GI253979963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCCA CAGAAGTCCA GGCTAAACCT CTTTTTAGCT GGAAAGCCCT GGGTTGGGCA 
CTGCTCTACT TTTGGTTTTT CTCTACTCTG CTACAGGCCA TTATTTACAT CAGTGGTTAT
AGTGGCACTA ACGGCATTCG CGACTCGCTG TTATTCAGTT CGCTGTGGTT GATCCCGGTA
TTCCTCTTTC CGAAGCGGAT TAAAATTATT GCCGCAGTAA TCGGCGTGGT GCTATGGGCG
GCCTCTCTGG CGGCGCTGTG CTACTACGTC ATCTACGGTC AGGAGTTCTC GCAGAGCGTT
CTGTTTGTGA TGTTCGAAAC CAACACCAAC GAAGCCAGCG AGTATTTAAG CCAGTATTTC
AGCCTGAAAA TTGTGCTTAT CGCGCTGGCC TATACGGCGG TGGCAGTTCT GCTGTGGACA
CGCCTGCGCC CGGTCTATAT TCCAAAGCCG TGGCGTTATG TTGTCTCTTT TGCCCTGCTT
TATGGCTTGA TTCTGCATCC GATCGCCATG AATACGTTTA TCAAAAACAA GCCGTTTGAG
AAAACGTTGG ACAACCTGGC CTCGCGTATG GAGCCTGCCG CACCGTGGCA ATTCCTGACC
GGCTATTATC AGTATCGTCA GCAACTAAAC TCGCTAACAA AGCTACTGAA TGAAAATAAT
GCCTTGCCGC CGCTGGCTAA TTTCAAAGAT GAATCGGGTA ACGAACCGCG CACCTTAGTG
CTGGTGATTG GCGAGTCAAC CCAGCGTGGA CGCATGAGTC TGTACGGTTA TCCGCGTGAA
ACCACGCCGG AGCTGGATGC GCTGCATAAA ACCGATCCGA ATCTGACCGT GTTTAATAAC
GTGGTTACGT CTCGTCCGTA CACCATTGAA ATCCTGCAAC AGGCGCTGAC CTTTGCCAAT
GAAAAGAACC CGGACCTGTA TCTGACGCAG CCGTCGCTGA TGAACATGAT GAAACAGGCG
GGTTATAAAA CCTTCTGGAT CACCAACCAG CAGACGATGA CCGCCCGCAA TACCATGCTG
ACGGTATTTT CGCGCCAGAC CGACAAGCAG TACTACATGA ACCAGCAACG TACGCAGAGT
GCGCGTGAAT ACGACACCAA CGTGCTGAAG CCGTTCCAGG ATGTGCTGAA TGACCCTGCG
CCGAAGAAAC TGATCATCGT TCATCTGCTG GGTACGCATA TCAAATACAA ATACCGCTAC
CCGGAAAATC AGGGCAAGTT TGATGGCAAT ACCGATCATG TTCCGCCAGG ATTAAGCGCA
GAAGAGCTGG AATCATATAA CGATTATGAC AACGCTAACC TGTATAACGA TCATGTGGTT
GCCAGCCTGA TTAAAGACTT TAAAGCGGCA GACCCGAACG GATTCCTGGT TTACTTCTCT
GACCACGGTG AAGAGGTTTA CGACACGCCG CCTCATAAAA CCCAGGGGCG TAATGAGGAC
AACCCGACGC GTCATATGTA CACCATTCCG TTCCTGCTGT GGACGTCGGA AAAATGGCAA
GCGACTCATC CCCGTGATTT CTCACAGGAT GTCGATCGTA AATACAGCCT GGCGGAACTG
ATCCACACCT GGTCAGATTT GGCGGGCTTA TCTTACGACG GTTACGATCC AACCCGTTCA
GTGGTGAATC CGCAGTTCAA AGAAACTACC CGCTGGATTG GTAACCCGTA CAAGAAAAAC
GCGCTGATCG ATTACGACAC ACTGCCGTAT GGCGATCAGG TGGGTAATCA GTAA
 
Protein sequence
MHSTEVQAKP LFSWKALGWA LLYFWFFSTL LQAIIYISGY SGTNGIRDSL LFSSLWLIPV 
FLFPKRIKII AAVIGVVLWA ASLAALCYYV IYGQEFSQSV LFVMFETNTN EASEYLSQYF
SLKIVLIALA YTAVAVLLWT RLRPVYIPKP WRYVVSFALL YGLILHPIAM NTFIKNKPFE
KTLDNLASRM EPAAPWQFLT GYYQYRQQLN SLTKLLNENN ALPPLANFKD ESGNEPRTLV
LVIGESTQRG RMSLYGYPRE TTPELDALHK TDPNLTVFNN VVTSRPYTIE ILQQALTFAN
EKNPDLYLTQ PSLMNMMKQA GYKTFWITNQ QTMTARNTML TVFSRQTDKQ YYMNQQRTQS
AREYDTNVLK PFQDVLNDPA PKKLIIVHLL GTHIKYKYRY PENQGKFDGN TDHVPPGLSA
EELESYNDYD NANLYNDHVV ASLIKDFKAA DPNGFLVYFS DHGEEVYDTP PHKTQGRNED
NPTRHMYTIP FLLWTSEKWQ ATHPRDFSQD VDRKYSLAEL IHTWSDLAGL SYDGYDPTRS
VVNPQFKETT RWIGNPYKKN ALIDYDTLPY GDQVGNQ