Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03789 |
Symbol | rhaA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 4002645 |
End bp | 4003910 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | L-rhamnose isomerase |
Protein accession | ACT45582 |
Protein GI | 253979912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCATGA CCACTCAACT GGAACAGGCC TGGGAGCTGG CGAAACAGCG TTTCGCGGCG GTGGGGATTG ATGTCGAGGA GGCGCTGCGC CAACTTGATC GTTTACCCGT TTCAATGCAC TGCTGGCAGG GCGATGATGT TTCCGGTTTT GAAAACCCGG AAGGTTCGCT GACCGGTGGG ATTCAGGCTA CTGGCAATTA TCCGGGCAAA GCGCGTAATG CCAGTGAGCT GCGTGCCGAT CTGGAACAGG CTATGCGGCT GATTCCGGGG CCGAAACGGC TTAATTTACA TGCCATCTAT CTGGAATCAG ACACGCCAGT CTCGCGCGAC CAGATCAAAC CAGAGCACTT CAAAAACTGG GTTGAATGGG CGAAAGCCAA TCAGCTCGGT CTGGATTTTA ACCCCTCCTG TTTTTCGCAT CCGCTAAGCG CCGATGGCTT TACGCTCTCG CATCCCGACG ACAGCATTCG CCAGTTCTGG ATTGATCACT GCAAGGCCAG CCGTCGCGTT TCGGCCTATT TTGGTGAGCA ACTCGGCACA CCGTCGGTGA TGAACATCTG GATCCCGGAT GGCATGAAAG ATATCACCGT TGACCGTCTC GCTCCGCGTC AGCGTCTGCT GGCTGCTCTG GATGAGGTAA TCAGCGAGAA GCTGGATCCG GCGCACCATA TCGACGCTGT TGAGAGCAAA TTGTTTGGCA TTGGTGCAGA GAGCTACACG GTTGGCTCCA ATGAGTTTTA CATGGGGTAT GCCACCAGCC GCCAGACTGC GCTGTGCCTG GACGCCGGGC ACTTCCACCC GACGGAAGTT ATTTCCGACA AGATTTCCGC CGCCATGCTG TATGTGCCGC AGTTGCTGCT GCACGTCAGC CGTCCGGTTC GCTGGGACAG CGATCACGTG GTGCTGCTGG ATGATGAAAC CCAGGCGATT GCCAGTGAGA TTGTGCGTCA CGATCTGTTC GACCGGGTGC ATATCGGCCT TGACTTCTTC GATGCCTCTA TCAACCGCAT TGCCGCGTGG GTCATTGGTA CACGCAATAT GAAAAAAGCC CTGCTGCGTG CGTTGCTGGA ACCTAGCGCT GAGCTGCGCA AGCTGGAAGC GGCGGGCGAT TACACTGCGC GTCTGGCACT GCTGGAAGAG CAGAAATCGT TGCCGTGGCA GGCAGTATGG GAAATGTATT GCCAACGTCA CGATACCCCA GCGGGTAGCG AATGGCTGGA GAGCGTGCGG GCTTATGAGA AAGCGATTTT GAGCCAGCGT GGGTAA
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Protein sequence | MRMTTQLEQA WELAKQRFAA VGIDVEEALR QLDRLPVSMH CWQGDDVSGF ENPEGSLTGG IQATGNYPGK ARNASELRAD LEQAMRLIPG PKRLNLHAIY LESDTPVSRD QIKPEHFKNW VEWAKANQLG LDFNPSCFSH PLSADGFTLS HPDDSIRQFW IDHCKASRRV SAYFGEQLGT PSVMNIWIPD GMKDITVDRL APRQRLLAAL DEVISEKLDP AHHIDAVESK LFGIGAESYT VGSNEFYMGY ATSRQTALCL DAGHFHPTEV ISDKISAAML YVPQLLLHVS RPVRWDSDHV VLLDDETQAI ASEIVRHDLF DRVHIGLDFF DASINRIAAW VIGTRNMKKA LLRALLEPSA ELRKLEAAGD YTARLALLEE QKSLPWQAVW EMYCQRHDTP AGSEWLESVR AYEKAILSQR G
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