Gene ECD_03789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03789 
SymbolrhaA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4002645 
End bp4003910 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content56% 
IMG OID 
ProductL-rhamnose isomerase 
Protein accessionACT45582 
Protein GI253979912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCATGA CCACTCAACT GGAACAGGCC TGGGAGCTGG CGAAACAGCG TTTCGCGGCG 
GTGGGGATTG ATGTCGAGGA GGCGCTGCGC CAACTTGATC GTTTACCCGT TTCAATGCAC
TGCTGGCAGG GCGATGATGT TTCCGGTTTT GAAAACCCGG AAGGTTCGCT GACCGGTGGG
ATTCAGGCTA CTGGCAATTA TCCGGGCAAA GCGCGTAATG CCAGTGAGCT GCGTGCCGAT
CTGGAACAGG CTATGCGGCT GATTCCGGGG CCGAAACGGC TTAATTTACA TGCCATCTAT
CTGGAATCAG ACACGCCAGT CTCGCGCGAC CAGATCAAAC CAGAGCACTT CAAAAACTGG
GTTGAATGGG CGAAAGCCAA TCAGCTCGGT CTGGATTTTA ACCCCTCCTG TTTTTCGCAT
CCGCTAAGCG CCGATGGCTT TACGCTCTCG CATCCCGACG ACAGCATTCG CCAGTTCTGG
ATTGATCACT GCAAGGCCAG CCGTCGCGTT TCGGCCTATT TTGGTGAGCA ACTCGGCACA
CCGTCGGTGA TGAACATCTG GATCCCGGAT GGCATGAAAG ATATCACCGT TGACCGTCTC
GCTCCGCGTC AGCGTCTGCT GGCTGCTCTG GATGAGGTAA TCAGCGAGAA GCTGGATCCG
GCGCACCATA TCGACGCTGT TGAGAGCAAA TTGTTTGGCA TTGGTGCAGA GAGCTACACG
GTTGGCTCCA ATGAGTTTTA CATGGGGTAT GCCACCAGCC GCCAGACTGC GCTGTGCCTG
GACGCCGGGC ACTTCCACCC GACGGAAGTT ATTTCCGACA AGATTTCCGC CGCCATGCTG
TATGTGCCGC AGTTGCTGCT GCACGTCAGC CGTCCGGTTC GCTGGGACAG CGATCACGTG
GTGCTGCTGG ATGATGAAAC CCAGGCGATT GCCAGTGAGA TTGTGCGTCA CGATCTGTTC
GACCGGGTGC ATATCGGCCT TGACTTCTTC GATGCCTCTA TCAACCGCAT TGCCGCGTGG
GTCATTGGTA CACGCAATAT GAAAAAAGCC CTGCTGCGTG CGTTGCTGGA ACCTAGCGCT
GAGCTGCGCA AGCTGGAAGC GGCGGGCGAT TACACTGCGC GTCTGGCACT GCTGGAAGAG
CAGAAATCGT TGCCGTGGCA GGCAGTATGG GAAATGTATT GCCAACGTCA CGATACCCCA
GCGGGTAGCG AATGGCTGGA GAGCGTGCGG GCTTATGAGA AAGCGATTTT GAGCCAGCGT
GGGTAA
 
Protein sequence
MRMTTQLEQA WELAKQRFAA VGIDVEEALR QLDRLPVSMH CWQGDDVSGF ENPEGSLTGG 
IQATGNYPGK ARNASELRAD LEQAMRLIPG PKRLNLHAIY LESDTPVSRD QIKPEHFKNW
VEWAKANQLG LDFNPSCFSH PLSADGFTLS HPDDSIRQFW IDHCKASRRV SAYFGEQLGT
PSVMNIWIPD GMKDITVDRL APRQRLLAAL DEVISEKLDP AHHIDAVESK LFGIGAESYT
VGSNEFYMGY ATSRQTALCL DAGHFHPTEV ISDKISAAML YVPQLLLHVS RPVRWDSDHV
VLLDDETQAI ASEIVRHDLF DRVHIGLDFF DASINRIAAW VIGTRNMKKA LLRALLEPSA
ELRKLEAAGD YTARLALLEE QKSLPWQAVW EMYCQRHDTP AGSEWLESVR AYEKAILSQR
G