| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03760 |
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| Symbol | yshA |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 3970301 |
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| End bp | 3970993 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | |
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| Product | predicted outer membrane porin L |
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| Protein accession | ACT45553 |
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| Protein GI | 253979883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.650816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TTAATGCAAT AATTTTATTA TCTTCTCTGA CCTCTGCCTC AGTATTCGCT
GGCGCATACG TCGAAAACAG GGAGGCATAT AATCTCGCCT CCGATCAGGG CGAGGTTATG
CTACGTGTGG GTTATAACTT CGATATGGGC GCGGGTATTA TGTTAACCAA TACCTACACC
TTTCAGCGAG AAGATGAACT AAAACATGGA TATAACGAAA TCGAAGGTTG GTATCCGTTA
TTTAAACCAA CCGATAAATT AACCATCCAG CCCGGTGGCT TAATTAATGA TAAGAGTATC
GGTTCGGGTG GTGCAGTGTA TCTGGACGTC AACTATAAAT TTGTACCATG GTTTAATCTG
ACAGTACGAA ATCGCTATAA CCATAATAAC TATAGTTCAA CAGATTTGAG CGGGGAACTG
GATAATAATG ACACCTATGA AATTGGTACC TACTGGAATT TTAAAATCAC CGATAAGTTC
TCCTATACAT TTGAGCCACA TTATTTTATA CGCGTAAATG ACTTTAATAG CAGCAATGGA
AAAGATCATC ACTGGGAAAT CACTAACACC TTCCGTTATC GCATTAATGA ACACTGGCTG
CCTTATTTCG AATTACGCTG GTTAGATCGT AATGTCGAAC CGTACCACCG CGAGCAAAAC
CAGATTCGTA TCGGGACGAA GTATTTCTTC TGA
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| Protein sequence | MKNINAIILL SSLTSASVFA GAYVENREAY NLASDQGEVM LRVGYNFDMG AGIMLTNTYT
FQREDELKHG YNEIEGWYPL FKPTDKLTIQ PGGLINDKSI GSGGAVYLDV NYKFVPWFNL
TVRNRYNHNN YSSTDLSGEL DNNDTYEIGT YWNFKITDKF SYTFEPHYFI RVNDFNSSNG
KDHHWEITNT FRYRINEHWL PYFELRWLDR NVEPYHREQN QIRIGTKYFF
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