| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03639 |
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| Symbol | rbsR |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | + |
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| Start bp | 3828474 |
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| End bp | 3829466 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | DNA-binding transcriptional repressor of ribose metabolism |
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| Protein accession | ACT45433 |
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| Protein GI | 253979763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00237415 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTACAA TGAAAGATGT TGCCCGCCTG GCGGGCGTTT CTACCTCAAC AGTTTCTCAC
GTTATCAATA AAGATCGCTT CGTCAGTGAA GCGATTACCG CCAAAGTTGA AGCGGCGATT
AAAGAACTCA ATTACGCGCC ATCAGCTCTG GCGCGTAGCC TCAAACTCAA TCAAACACAT
ACCATTGGCA TGTTGATCAC TGCCAGTACC AATCCTTTCT ATTCAGAACT GGTGCGTGGC
GTTGAACGCA GCTGCTTCGA ACGCGGTGAT AGTCTTGTCC TTTGCAATAC CGAAGGCGAT
GAACAGCGGA TGAATCGCAA TCTGGAAACG CTGATGCAAA AACGCGTTGA TGGCTTGCTG
TTACTGTGCA CCGAAACGCA TCAGCCTTCG CGTGAAATCA TGCAACGTTA TCCGACAGTG
CCTACCGTGA TGATGGACTG GGCTCCGTTC GATGGCGACA GCGATCTTAT TCAGGATAAC
TCGTTGCTGG GCGGAGACTT AGCAACGCAA TATCTGATCG ATAAAGGTCA TACCCGTATC
GCCTGTATTA CCGGCCCGCT GGATAAAACT CCGGCGCGCC TGCGGTTGGA AGGTTATCGG
GCGGCGATGA AACGTGCGGG TCTCAACATT CCTGATGGCT ATGAAGTCAC TGGTGATTTT
GAATTTAACG GCGGGTTTGA CGCTATGCGC CAACTGCTAT CACATCCGCT GCGTCCTCAG
GCCGTCTTTA CCGGAAATGA CGCTATGGCT GTTGGCGTTT ACCAGGCGTT ATATCAGGCA
GAGTTACAGG TTCCGCAGGA TATCGCGGTG ATTGGCTATG ACGATATCGA ACTGGCAAGC
TTTATGACGC CACCATTAAC CACTATCCAC CAACCGAAAG ATGAACTGGG GGAGCTGGCG
ATTGATGTAC TCATCCATCG GATAACCCAG CCAACTCTTC AGCAACAACG ATTACAACTT
ACTCCGATTC TGATGGAACG CGGTTCGGCT TAG
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| Protein sequence | MATMKDVARL AGVSTSTVSH VINKDRFVSE AITAKVEAAI KELNYAPSAL ARSLKLNQTH
TIGMLITAST NPFYSELVRG VERSCFERGD SLVLCNTEGD EQRMNRNLET LMQKRVDGLL
LLCTETHQPS REIMQRYPTV PTVMMDWAPF DGDSDLIQDN SLLGGDLATQ YLIDKGHTRI
ACITGPLDKT PARLRLEGYR AAMKRAGLNI PDGYEVTGDF EFNGGFDAMR QLLSHPLRPQ
AVFTGNDAMA VGVYQALYQA ELQVPQDIAV IGYDDIELAS FMTPPLTTIH QPKDELGELA
IDVLIHRITQ PTLQQQRLQL TPILMERGSA
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