Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03604 |
Symbol | yieC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 3789408 |
End bp | 3791024 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | carbohydrate-specific outer membrane porin, cryptic |
Protein accession | ACT45399 |
Protein GI | 253979729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGAC GAAATCTTAT TACCTCTGCC ATCTTATTAA TGGCACCGTT AGCCTTTTCT GCACAATCAT TGGCTGAATC ATTAACGGTG GAACAACGCC TTGAGTTATT AGAAAAAGCG TTAAGAGAAA CGCAAAGCGA ACTCAAAAAG TATAAAGATG AAGAGAAGAA AAAATATACG CCAGCGACGG TGAATCGTAG CGTAAGTACG AATGATCAAG GGTATGCCGC CAATCCGTTC CCGACCAGTA GTGCCGCAAA ACCTGATGCT GTACTGGTCA AAAATGAAGA GAAAAATGCC AGTGAGACAG GCTCGATTTA TTCTTCCATG ACTCTGAAAG ATTTCAGTAA GTTTGTGAAA GATGAAATTG GCTTTAGTTA CAACGGCTAT TACCGTTCTG GTTGGGGGAC CGCCTCTCAT GGTTCACCTA AATCATGGGC GATTGGTTCT CTGGGCCGCT TTGGTAACGA ATACTCCGGC TGGTTTGATT TGCAGTTAAA ACAACGTGTC TACAACGAAA ACGGCAAACG GGTTGATGCC GTTGTGATGA TGGATGGTAA CGTTGGTCAG CAGTACTCAA CCGGCTGGTT TGGCGATAAC GCCGGTGGCG AGAACTTTAT GCAGTTCTCC GATATGTACG TTACCACCAA AGGTTTCCTG CCCTTTGCGC CAGAGGCTGA TTTCTGGGTG GGTAAACACG GTGCGCCGAA AATTGAAATC CAGATGCTGG ACTGGAAAAC GCAGCGTACT GATGCCGCAG CGGGTGTAGG TCTGGAAAAC TGGAAAGTCG GTCCGGGTAA AATTGATATC GCGCTGGTTC GCGAAGATGT CGATGATTAC GATCGCAGCC TGCAAAACAA ACAGCAGATT AATACCAATA CTATTGATTT ACGCTATAAA GATATCCCGT TATGGGATAA AGCGACCTTA ATGGTGAGTG GTCGTTATGT CACGGCAAAC GAAAGCGCAT CGGAAAAAGA TAATCAGGAT AATAACGGGT ATTATGACTG GAAAGATACC TGGATGTTCG GCACATCTTT AACGCAGAAA TTTGATAAAG GTGGCTTCAA CGAATTCTCC TTCCTGGTTG CGAATAACTC TATCGCCAGT AACTTTGGCC GTTATGCTGG CGCAAGTCCA TTTACCACCT TTAATGGTCG TTATTATGGT GATCACACCG GCGGAACAGC AGTTCGTCTG ACCTCGCAGG GCGAAGCCTA TATCGGCGAT CATTTTATTG TGGCTAACGC GATTGTTTAC TCCTTCGGTA ACGATATTTA TATCTACGAA ACAGGCGCAC ACTCTGATTT CGAATCTATT CGTGCGGTTG TTCGCCCGGC CTATATTTGG GACCAATATA ACCAGACAGG TGTTGAACTG GGCTATTTCA CCCAGCAAAA CAAAGATGCG AATAGTAATA AATTTAATGA GTCTGGTTAT AAAACCACGC TCTTCCATAC CTTTAAAGTC AATACCAGTA TGTTGACCTC GCGTCCGGAA ATTCGTTTCT ACGCCACGTA TATCAAAGCC CTGGAAAACG AACTGGATGG CTTCACCTTC GAAGACAATA AAGACGACCA GTTTGCTGTC GGTGCCCAGG CTGAAATCTG GTGGTAA
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Protein sequence | MFRRNLITSA ILLMAPLAFS AQSLAESLTV EQRLELLEKA LRETQSELKK YKDEEKKKYT PATVNRSVST NDQGYAANPF PTSSAAKPDA VLVKNEEKNA SETGSIYSSM TLKDFSKFVK DEIGFSYNGY YRSGWGTASH GSPKSWAIGS LGRFGNEYSG WFDLQLKQRV YNENGKRVDA VVMMDGNVGQ QYSTGWFGDN AGGENFMQFS DMYVTTKGFL PFAPEADFWV GKHGAPKIEI QMLDWKTQRT DAAAGVGLEN WKVGPGKIDI ALVREDVDDY DRSLQNKQQI NTNTIDLRYK DIPLWDKATL MVSGRYVTAN ESASEKDNQD NNGYYDWKDT WMFGTSLTQK FDKGGFNEFS FLVANNSIAS NFGRYAGASP FTTFNGRYYG DHTGGTAVRL TSQGEAYIGD HFIVANAIVY SFGNDIYIYE TGAHSDFESI RAVVRPAYIW DQYNQTGVEL GYFTQQNKDA NSNKFNESGY KTTLFHTFKV NTSMLTSRPE IRFYATYIKA LENELDGFTF EDNKDDQFAV GAQAEIWW
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