Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03489 |
Symbol | waaQ |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 3673859 |
End bp | 3674917 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | lipopolysaccharide core biosynthesis protein |
Protein accession | ACT45287 |
Protein GI | 253979617 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATAAGC CATTTCGAAG AATTTTGCTC ATTAAGATGC GTTTTCATGG GGATATGTTA TTAACGACTC CCGTCATTAG TTCGCTGAAA AAAAATTACC CTGACGCAAA AATCGATGTG CTGCTTTATC AGGACACCAT CCCGATCCTG TCTGAAAATC CAGAGATTAA CGCGCTCTAC GGCATAAAAA ATAAAAAAGC AAAAGCCTCA GAAAAAATTG CCAACTTTTT TCATCTCATC AAGGTATTAC GTGCCAATAA GTATGACCTT ATCGTCAATC TTACCGATCA ATGGATGGTT GCTATACTGG TTCGCTTATT AAATGCCCGT GTGAAAATTT CCCAGGATTA TCATCATCGG CAGTCTGCTT TTTGGCGTAA AAGTTTCACC CATTTGGTGC CGTTGCAGGG TGGAAATGTG GTGGAAAGTA ACTTATCCGT GCTGACACCA TTGGGACTTG ATTCGTTGGT GAAGCAGACA ACCATGAGTT ACCCGCCTGC AAGCTGGAAA CGTATGCGTC GCGAACTTGA TCACGCTGGT GTTGGACAAA ATTATGTGGT TATCCAACCT ACGGCGCGGC AAATCTTCAA ATGCTGGGAC AACGCCAAGT TTTCCGCTGT GATTGATGCC TTACATGCTC GTGGTTATGA AGTTGTTCTG ACGTCCGGCC CGGATAAAGA CGATCTGGCC TGCGTCAATG AAATTGCGCA GGGATGCCAG ACGCCACCAG TAACGGCGCT GGCTGGAAAG GTGACCTTCC CGGAACTTGG TGCGTTAATC GATCATGCGC AGCTGTTTAT TGGCGTTGAT TCCGCACCGG CGCATATTGC CGCTGCAGTT AATACGCCGC TGATATCGCT GTTTGGCGCA ACAGATCATA TTTTCTGGCG TCCCTGGTCA AATAACATGA TTCAATTCTG GGCGGGAGAT TACCGGGAAA TGCCAACGCG CGATCAGCGT GACCGAAATG AGATGTATCT TTCGGCTATT CCGGCGGCAG ATGTCATTGC TGCTGTCGAT AAATTACTGC CCTCCTCCAC GACAGGTACG TCGTTATGA
|
Protein sequence | MDKPFRRILL IKMRFHGDML LTTPVISSLK KNYPDAKIDV LLYQDTIPIL SENPEINALY GIKNKKAKAS EKIANFFHLI KVLRANKYDL IVNLTDQWMV AILVRLLNAR VKISQDYHHR QSAFWRKSFT HLVPLQGGNV VESNLSVLTP LGLDSLVKQT TMSYPPASWK RMRRELDHAG VGQNYVVIQP TARQIFKCWD NAKFSAVIDA LHARGYEVVL TSGPDKDDLA CVNEIAQGCQ TPPVTALAGK VTFPELGALI DHAQLFIGVD SAPAHIAAAV NTPLISLFGA TDHIFWRPWS NNMIQFWAGD YREMPTRDQR DRNEMYLSAI PAADVIAAVD KLLPSSTTGT SL
|
| |