Gene ECD_03417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03417 
SymbolxylA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp3591597 
End bp3592919 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID 
Productxylose isomerase 
Protein accessionACT45217 
Protein GI253979547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCT ATTTTGACCA GCTCGATCGC GTTCGTTATG AAGGCTCAAA ATCCTCAAAC 
CCGTTAGCAT TCCGTCACTA CAATCCCGAC GAACTGGTGT TGGGTAAGCG TATGGAAGAG
CACTTGCGTT TTGCCGCCTG CTACTGGCAC ACCTTCTGCT GGAACGGGGC GGATATGTTT
GGTGTGGGGG CGTTTAATCG TCCGTGGCAG CAGCCTGGTG AGGCACTGGC GTTGGCGAAG
CGTAAAGCAG ATGTCGCATT TGAGTTTTTC CACAAGTTAC ATGTGCCATT TTATTGCTTC
CACGATGTGG ATGTTTCCCC TGAGGGCGCG TCGTTAAAAG AGTACATCAA TAATTTTGCG
CAAATGGTTG ATGTCCTGGC AGGCAAGCAA GAAGAGAGCG GCGTGAAGCT GCTGTGGGGA
ACCGCCAACT GCTTTACAAA CCCTCGCTAC GGCGCGGGTG CGGCGACGAA CCCAGATCCT
GAAGTCTTCA GCTGGGCGGC AACGCAAGTT GTTACAGCGA TGGAAGCAAC CCATAAATTG
GGCGGTGAAA ACTATGTCCT GTGGGGCGGT CGTGAAGGTT ACGAAACGCT GTTAAATACC
GACTTGCGTC AGGAGCGTGA ACAACTGGGC CGCTTTATGC AGATGGTGGT TGAGCATAAA
CATAAAATCG GTTTCCAGGG CACGTTGCTT ATCGAACCGA AACCGCAAGA ACCGACCAAA
CATCAATATG ATTACGATGC CGCGACGGTC TATGGCTTCC TGAAACAGTT TGGTCTGGAA
AAAGAGATTA AACTGAACAT TGAAGCTAAC CACGCGACGC TGGCAGGTCA CTCTTTCCAT
CATGAAATAG CCACCGCCAT TGCGCTTGGC CTGTTCGGTT CTGTCGACGC CAACCGTGGC
GATGCGCAAC TGGGCTGGGA CACCGACCAG TTCCCGAACA GTGTGGAAGA GAATGCGCTG
GTGATGTATG AAATTCTCAA AGCAGGCGGT TTCACCACCG GTGGTCTGAA CTTCGATGCC
AAAGTACGTC GTCAAAGTAC TGATAAATAT GATCTGTTTT ACGGTCATAT CGGCGCGATG
GATACGATGG CACTGGCGCT GAAAATTGCA GCGCGCATGA TTGAAGATGG CGAGCTGGAT
AAACGCATCG CGCAGCGTTA TTCCGGCTGG AATAGCGAAT TGGGCCAGCA AATCCTGAAA
GGCCAAATGT CACTGGCAGA TTTAGCCAAA TATGCTCAGG AACATAATTT GTCTCCGGTG
CATCAGAGTG GTCGCCAGGA GCAACTGGAA AATCTGGTAA ATCATTATCT GTTCGACAAA
TAA
 
Protein sequence
MQAYFDQLDR VRYEGSKSSN PLAFRHYNPD ELVLGKRMEE HLRFAACYWH TFCWNGADMF 
GVGAFNRPWQ QPGEALALAK RKADVAFEFF HKLHVPFYCF HDVDVSPEGA SLKEYINNFA
QMVDVLAGKQ EESGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMEATHKL
GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK
HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG
DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM
DTMALALKIA ARMIEDGELD KRIAQRYSGW NSELGQQILK GQMSLADLAK YAQEHNLSPV
HQSGRQEQLE NLVNHYLFDK