Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03359 |
Symbol | hdeD |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 3518182 |
End bp | 3518754 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | acid-resistance membrane protein |
Protein accession | ACT45160 |
Protein GI | 253979490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.493233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATATA TAGATAAGGC AACAATTTTG AAGTTTGATC TGGAGATGCT TAAAAAACAT CGCAGAGCAA TCCAGTTTAT TGCCGTGCTG CTGTTTATCG TCGGGTTGCT GTGTATCAGT TTCCCGTTCG TCTCTGGCGA TATTTTAAGC ACAGTAGTGG GTGCATTATT AATCTGCTCG GGTATTGCGC TTATTGTCGG GTTATTCAGC AACCGCAGTC ATAATTTCTG GCCGGTATTA TCCGGTTTCC TCGTCGCAGT CGCCTATTTA TTGATCGGCT ATTTCTTCAT CCGCGCACCG GAGCTGGGCA TTTTTGCCAT TGCGGCATTT ATTGCCGGTT TGTTCTGTGT TGCAGGGGTT ATTCGCCTGA TGAGTTGGTA TCGTCAGCGT TCAATGAAAG GCAGCTGGCT ACAGCTCGTT ATTGGTGTGC TGGATATCGT CATTGCCTGG ATATTCCTTG GTGCAACGCC GATGGTGTCT GTAACGCTGG TTTCCACACT GGTGGGAATT GAACTGATAT TTAGCGCCGC CAGCCTGTTC AGCTTCGCCA GTTTGTTCGT TAAGCAGCAA TAA
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Protein sequence | MLYIDKATIL KFDLEMLKKH RRAIQFIAVL LFIVGLLCIS FPFVSGDILS TVVGALLICS GIALIVGLFS NRSHNFWPVL SGFLVAVAYL LIGYFFIRAP ELGIFAIAAF IAGLFCVAGV IRLMSWYRQR SMKGSWLQLV IGVLDIVIAW IFLGATPMVS VTLVSTLVGI ELIFSAASLF SFASLFVKQQ
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