Gene ECD_03225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03225 
SymbolyhfR 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp3363653 
End bp3364384 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID 
Productpredicted DNA-binding transcriptional regulator 
Protein accessionACT45029 
Protein GI253979359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTA CGGACCGCTA CTCTCATCAA CTCCTCTACG CTACCGTCCG CCAGCGACTG 
CTGGATGATA TCGCGCAGGG GGTTTACCAG GCCGGGCAAC AGATCCCTAC CGAAAACGAG
CTTTGTACAC AATATAACGT CAGCCGCATT ACCATTCGCA AAGCCATCAG CGACTTAGTG
GCAGACGGCG TACTGATCCG CTGGCAGGGA AAAGGCACCT TTGTACAAAG CCAGAAAGTT
GAAAACGCCC TGCTTACTGT CAGTGGTTTT ACCGATTTTG GCGTCTCACA AGGCAAGGCG
ACGAAAGAGA AAGTGATCGA ACAGGAACGG GTCAGCGCCG CGCCGTTTTG CGAAAAGCTG
AACATCCCCG GAAACAGCGA AGTGTTCCAT CTCTGCCGGG TGATGTATCT CGATAAAGAG
CCGCTGTTTA TTGATAGTTC ATGGATCCCG CTGTCGCGTT ATCCTGACTT TGATGAGATT
TACGTCGAAG GAAGCTCCAC CTATCAGTTA TTTCAGGAGC GTTTTGACAC GCGAGTGGTC
AGCGACAAAA AGACCATCGA TATCTTTGCC GCCACCCGCC CGCAGGCAAA ATGGCTGAAA
TGCGAACTGG GCGAACCGTT GTTTCGCATC AGCAAAATCG CCTTTGATCA GAATGACAAA
CCGGTGCACG TCTCCGAACT CTTCTGCCGC GCCAATCGCA TCACCTTAAC TATTGATAAT
AAAAGACATT AA
 
Protein sequence
MSATDRYSHQ LLYATVRQRL LDDIAQGVYQ AGQQIPTENE LCTQYNVSRI TIRKAISDLV 
ADGVLIRWQG KGTFVQSQKV ENALLTVSGF TDFGVSQGKA TKEKVIEQER VSAAPFCEKL
NIPGNSEVFH LCRVMYLDKE PLFIDSSWIP LSRYPDFDEI YVEGSSTYQL FQERFDTRVV
SDKKTIDIFA ATRPQAKWLK CELGEPLFRI SKIAFDQNDK PVHVSELFCR ANRITLTIDN
KRH