Gene ECD_03134 details

Gene Information

• Locus tag: ECD_03134
• Symbol: yrdD
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 3292590
• End bp: 3293132
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 50%
• Product: predicted DNA topoisomerase
• Protein accession: ACT44938
• Protein GI: 253979268

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.103667
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAT CAGCACTGTT CACGGTGCGT AATAATGAGT CCTGCCCAAA GTGCGGGGCT 
GAACTGGTTA TTCGATCCGG GAAACACGGT CCGTTTCTTG GATGCTCACA GTATCCGGCG 
TGTGACTACG TCCGTCCTCT GAAATCTTCA GCGGATGGAC ATATCGTCAA AGTTCTGGAG 
GGGCAGGTTT GCCCTGCATG TGGCGCAAAT CTGGTATTAC GCCAGGGACG CTTTGGTATG 
TTTATTGGTT GCATTAACTA CCCTGAATGC GAACATACCG AACTTATCGA TAAACCGGAC 
GAAACAGCAA TTACATGCCC CCAATGTCGG ACGGGCCATC TGGTCCAGCG CCGCTCCCGT 
TATGGCAAAA CATTTCACTC TTGTGATCGC TACCCGGAGT GTCAATTTGC CATTAACTTC 
AAACCCATAG CTGGAGAATG CCCTGAGTGT CATTATCCGC TACTCATCGA AAAGAAAACC 
GCGCAGGGTG TAAAACACTT TTGTGCCAGT AAACAATGTG GAAAGCCGGT TTCGGCGGAA 
TAA 

 

Protein sequence

MAKSALFTVR NNESCPKCGA ELVIRSGKHG PFLGCSQYPA CDYVRPLKSS ADGHIVKVLE 
GQVCPACGAN LVLRQGRFGM FIGCINYPEC EHTELIDKPD ETAITCPQCR TGHLVQRRSR 
YGKTFHSCDR YPECQFAINF KPIAGECPEC HYPLLIEKKT AQGVKHFCAS KQCGKPVSAE