Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03103 |
Symbol | yhcS |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 3250682 |
End bp | 3251611 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | predicted DNA-binding transcriptional regulator, efflux system |
Protein accession | ACT44907 |
Protein GI | 253979237 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGAC TAAAACGCAT GTCGGTGTTT GCCAAAGTAG TTGAATTTGG CTCTTTTACC GCCGCCGCCA GACAGCTACA GATGAGCGTT TCGTCCATCA GTCAGACGGT GTCAAAACTG GAAGATGAGT TACAGGTAAA GCTATTAAAC CGTAGTACAC GCAGCATTGG TCTGACTGAA GCCGGCAGAA TTTACTACCA GGGCTGCCGT CGGATGCTCC ATGAAGTGCA GGATGTTCAT GAGCAACTGT ATGCCTTCAA TAACACCCCC ATCGGGACGC TGCGCATTGG CTGTTCTTCA ACTATGGCAC AAAATGTTCT CGCCGGGCTG ACAGCAAAAA TGCTGAAAGA ATACCCAGGT TTGAGCGTCA ATCTGGTTAC CGGAATTCCT GCCCCCGACC TGATTGCCGA TGGTCTGGAT GTGGTAATCC GCGTCGGCGC GTTGCAGGAT TCCAGCCTGT TTTCCCGCCG TCTGGGCGCG ATGCCGATGG TGGTGTGCGC CGCGAAAAGC TATCTCACAC AATACGGCAT ACCGGAAAAA CCCGCCGATT TGAGTAGTCA TTCATGGCTT GAATACAGCG TGCGGCCCGA CAATGAATTT GAACTGATTG CACCGGAAGG GATCTCGACT CGCCTGATCC CGCAAGGGAG ATTTGTGACT AATGATCCGA TGACGCTGGT GCGCTGGCTA ACGGCGGGTG CCGGGATCGC CTATGTGCCG CTGATGTGGG TGATCAACGA GATCAATCGT GGGGAGCTGG AGATCCTGCT GCCGCGTTAT CAGTCAGATC CACGCCCGGT TTATGCGTTA TATACCGAAA AAGATAAGCT GCCGCTGAAG GTACAGGTCG TGATCAACTC GCTGACGGAT TATTTTGTTG AGGTCGGTAA ATTGTTTCAG GAGATGCACG GGCGCGGGAA AGAGAAGTAA
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Protein sequence | MERLKRMSVF AKVVEFGSFT AAARQLQMSV SSISQTVSKL EDELQVKLLN RSTRSIGLTE AGRIYYQGCR RMLHEVQDVH EQLYAFNNTP IGTLRIGCSS TMAQNVLAGL TAKMLKEYPG LSVNLVTGIP APDLIADGLD VVIRVGALQD SSLFSRRLGA MPMVVCAAKS YLTQYGIPEK PADLSSHSWL EYSVRPDNEF ELIAPEGIST RLIPQGRFVT NDPMTLVRWL TAGAGIAYVP LMWVINEINR GELEILLPRY QSDPRPVYAL YTEKDKLPLK VQVVINSLTD YFVEVGKLFQ EMHGRGKEK
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