| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03092 |
|---|
| Symbol | yhcM |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 3240033 |
|---|
| End bp | 3241160 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | conserved protein with nucleoside triphosphate hydrolase domain |
|---|
| Protein accession | ACT44896 |
|---|
| Protein GI | 253979226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00364755 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCG TTACCCCAAC ATCGCAATAC CTGAAGGCGC TCAATGAAGG CAGCCATCAA
CCCGACGACG TTCAAAAAGA GGCCGTCAGC CGCCTGGAAA TTATTTATCA AGAACTCATC
AATAGCAGGC CACCAGCCCC CAGGACGAGT GGGCTAATGG CGCGGGTCGG TAAGCTGTGG
GGTAAACGCG AAGACACAAA GCATACGCCA GTGCGTGGCT TATATATGTG GGGCGGTGTA
GGACGCGGGA AAACCTGGCT GATGGACCTT TTCTATCAAA GCCTGCCGGG AGAGCGGAAA
CAGCGCCTGC ACTTTCACCG TTTTATGCTG CGGGTGCACG AAGAGCTAAC TGCCTTACAG
GGGCAGACCG ATCCGCTGGA AATTATTGCC GATCGCTTTA AAGCCGAAAC TGACGTGCTC
TGTTTTGACG AATTTTTTGT TTCTGATATT ACCGACGCCA TGCTACTTGG CGGTCTGATG
AAAGCCCTGT TCACCCGCGG TATTACCCTG GTTGCGACGT CAAATATTCC GCCGGACGAA
CTTTATCGAA ATGGCCTGCA ACGTGCGCGT TTTCTGCCTG CAATCGATGC CATTAAACAG
CATTGTGATG TAATGAACGT GGACGCTGGT GTTGATTATC GACTGCGTAC ACTCACTCAG
GCGCATCTGT GGCTTTCGCC ACTCAACGAT GAAACCCGGG CGCAGATGGA TAAACTATGG
TTGGCGCTGG CGGGGGCGAA ACGAGAAAAT TCACCGACGT TAGAAATCAA CCATCGGCCA
TTGGCGACAA TGGGCGTCGA GAACCAGACG CTGGCGGTCT CTTTTACTAC GCTGTGCGTC
GACGCCCGCA GTCAGCATGA CTATATTGCG CTCTCACGTC TCTTTCATAC GGTCATGTTG
TTTGATGTAC CAGTTATGAC GCGGTTGATG GAGAGCGAAG CGCGGCGCTT TATTGCGCTG
GTGGATGAGT TTTACGAGCG CCATGTCAAA TTAGTGGTGA GTGCAGAAGT GCCGCTGTAT
GCAATTTATC AGGGCGAGCG GCTGAAATTT GAGTTCCAGC GTTGCCTGTC ACGTCTGCAA
GAGATGCAAA GCGAAGAGTA TCTGAAGCGC GAGCATTTAG CAGGTTAA
|
|---|
| Protein sequence | MQSVTPTSQY LKALNEGSHQ PDDVQKEAVS RLEIIYQELI NSRPPAPRTS GLMARVGKLW
GKREDTKHTP VRGLYMWGGV GRGKTWLMDL FYQSLPGERK QRLHFHRFML RVHEELTALQ
GQTDPLEIIA DRFKAETDVL CFDEFFVSDI TDAMLLGGLM KALFTRGITL VATSNIPPDE
LYRNGLQRAR FLPAIDAIKQ HCDVMNVDAG VDYRLRTLTQ AHLWLSPLND ETRAQMDKLW
LALAGAKREN SPTLEINHRP LATMGVENQT LAVSFTTLCV DARSQHDYIA LSRLFHTVML
FDVPVMTRLM ESEARRFIAL VDEFYERHVK LVVSAEVPLY AIYQGERLKF EFQRCLSRLQ
EMQSEEYLKR EHLAG
|
|---|
| |