Gene ECD_03007 details

Gene Information

• Locus tag: ECD_03007
• Symbol: agaD
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 3153976
• End bp: 3154767
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 49%
• Product: N-acetylgalactosamine-specific enzyme IID component of PTS
• Protein accession: ACT44811
• Protein GI: 253979141

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATCTG AAATCAGTAA AAAAGATATC ACCCGTCTGG GCTTTCGTTC GTCGCTGCTG 
CAAGCGAGCT TTAACTACGA AAGGATGCAG GCGGGCGGTT TTACTTGGGC GATGTTGCCG 
ATCCTGAAAA AGATTTATAA GGACGACAAA CCGGGCTTAA GCGCGGCGAT GAAAGATAAC 
CTCGAATTTA TTAATACCCA CCCGAATCTG GTCGGATTCC TGATGGGGTT ATTAATTTCG 
ATGGAAGAAA AAGGAGAAAA CCGCGACACC ATTAAAGGCC TCAAAGTGGC ACTGTTTGGC 
CCAATCGCCG GGATTGGCGA TGCGATTTTC TGGTTTACTT TGTTGCCGAT TATGGCGGGA 
ATTTGCTCAT CATTTGCCAG CCAGGGAAAC CTGCTGGGGC CGATTCTATT TTTCGCCGTT 
TACCTGCTTA TCTTTTTCCT GCGCGTCGGC TGGACCCACG TCGGTTATTC AGTCGGCGTG 
AAGGCGATCG ATAAAGTGCG AGAGAACTCG CAGATGATTG CCCGTTCGGC AACCATCCTC 
GGGATCACGG TAATCGGCGG GCTGATCGCT TCGTATGTGC ATATTAACGT GGTGACATCG 
TTTGCCATCG ACAGTACCCA CAGCGTCGCG CTGCAGCAGG ATTTCTTCGA TAAAGTCTTC 
CCGAACATTT TACCGATGGC CTACACCCTG CTGATGTATT ACTTCCTGCG GGTGAAAAAA 
GCGCATCCGG TGCTGTTAAT CGGCGTGACT TTTGTGCTCT CTATTGTTTG TTCCGCATTC 
GGCATTTTGT AA 

 

Protein sequence

MGSEISKKDI TRLGFRSSLL QASFNYERMQ AGGFTWAMLP ILKKIYKDDK PGLSAAMKDN 
LEFINTHPNL VGFLMGLLIS MEEKGENRDT IKGLKVALFG PIAGIGDAIF WFTLLPIMAG 
ICSSFASQGN LLGPILFFAV YLLIFFLRVG WTHVGYSVGV KAIDKVRENS QMIARSATIL 
GITVIGGLIA SYVHINVVTS FAIDSTHSVA LQQDFFDKVF PNILPMAYTL LMYYFLRVKK 
AHPVLLIGVT FVLSIVCSAF GIL