| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02838 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 2970281 |
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| End bp | 2972341 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | GspD, hypothetical type II secretion protein |
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| Protein accession | ACT44642 |
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| Protein GI | 253978972 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000664316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTGGC GTGATATTAC GTTGTCGGTC TGGCGTAAGA AGACAACTGG CCTCAAAACA
AAAAAGCGTT TACTGCCGCT GGTGCTGGCA GCGGCATTAT GCAGTTCACC GGTTTGGGCG
GAAGAAGCCA CTTTCACCGC CAATTTTAAA GATACCGACC TGAAATCGTT CATCGAAACC
GTCGGCGCTA ACCTTAATAA AACCATCATT ATGGGGCCGG GCGTACAGGG GAAAGTGAGT
ATTCGTACCA TGACTCCGCT CAATGAACGC CAGTATTACC AGCTATTCCT TAACCTGCTG
GAAGCACAGG GGTATGCCGT CGTACCGATG GAAAACGACG TGCTGAAGGT GGTGAAATCC
AGCGCCGCGA AAGTCGAGCC ACTGCCGCTG GTCGGTGAAG GCAGCGACAA CTACGCGGGC
GATGAAATGG TCACCAAAGT AGTGCCGGTA CGTAATGTGT CGGTCCGCGA ATTGGCACCG
ATTCTGCGCC AGATGATCGA CAGCGCAGGC TCAGGCAACG TTGTTAATTA CGATCCCTCC
AACGTGATTA TGCTCACCGG ACGCGCCTCC GTTGTGGAGC GCCTGACGGA AGTGATCCAG
CGTGTGGATC ACGCGGGTAA TCGCACTGAA GAGGTGATCC CGCTGGATAA CGCCTCGGCT
TCGGAAATCG CCCGCGTGCT GGAAAGCCTG ACCAAAAACA GCGGCGAGAA CCAGCCAGCA
ACGCTGAAAT CTCAAATTGT CGCCGATGAA CGCACCAACA GCGTGATTGT CAGTGGTGAC
CCCGCCACGC GGGACAAAAT GCGCCGTCTG ATCCGTCGCC TGGACTCAGA AATGGAGCGC
AGCGGCAACA GCCAGGTTTT CTATCTCAAA TACAGCAAAG CCGAAGATCT GGTCGATGTA
CTGAAGCAGG TCAGCGGTAC GCTCACGGCG GCTAAAGAAG AGGCGGAAGG CACGGTCGGT
AGCGGGCGTG AGGTTGTCTC CATCGCCGCC AGCAAACACA GTAATGCCCT GATTGTTACC
GCGCCGCAGG ACATCATGCA GTCGCTGCAA AGCGTGATTG AACAACTGGA TATTCGCCGT
GCTCAGGTGC ATGTCGAGGC GTTGATCGTG GAAGTTGCTG AAGGCAGCAA TATCAACTTC
GGCGTGCAGT GGGCGTCGAA AGATGCCGGA TTAATGCAGT TTGCTAACGG TACGCAGATC
CCTATTGGCA CGCTGGGGGC AGCCATTTCT CAGGCGAAAC CGCAGAAAGG CTCGACGGTA
ATCAGTGAAA ACGGCGCTAC CACCATAAAT CCGGATACTA ACGGCGATCT CTCCACGCTT
GCTCAGCTTC TTTCCGGCTT TAGCGGTACG GCGGTTGGTG TGGTGAAAGG CGACTGGATG
GCGCTGGTGC AGGCGGTTAA AAACGACTCC AGCTCTAACG TGCTCTCCAC GCCGAGCATC
ACCACGCTGG ACAACCAGGA AGCCTTCTTC ATGGTGGGCC AGGACGTTCC GGTATTAACT
GGATCTACCG TTGGCTCCAA TAACAGCAAT CCTTTCAATA CGGTAGAGAG GAAAAAAGTC
GGCATCATGC TGAAAGTCAC GCCGCAGATT AACGAAGGAA ACGCGGTACA GATGGTGATT
GAGCAGGAAG TCTCGAAGGT GGAAGGACAG ACCAGCCTCG ACGTCGTGTT TGGTGAGCGC
AAACTGAAGA CCACCGTGCT GGCTAACGAT GGCGAGCTGA TTGTGCTTGG CGGTCTGATG
GATGATCAGG CAGGAGAAAG CGTGGCGAAA GTGCCGCTGC TGGGCGATAT CCCGTTGATT
GGTAACCTGT TTAAATCGAC GGCGGATAAA AAAGAAAAAC GTAACCTGAT GGTGTTTATC
CGCCCGACCA TTCTGCGTGA CGGTATGGCG GCAGACGGCG TGTCGCAGCG CAAATATAAC
TACATGCGCG CCGAGCAAAT CTACCGCGAT GAGCAAGGCT TAAGCCTGAT GCCGCACACC
GCGCAGCCGG TACTGCCAGC GCAAAACCAG GCCTTACCGC CGGAAGTTCG CGCATTCCTC
AATGCCGGGA GAACGCGTTA A
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| Protein sequence | MFWRDITLSV WRKKTTGLKT KKRLLPLVLA AALCSSPVWA EEATFTANFK DTDLKSFIET
VGANLNKTII MGPGVQGKVS IRTMTPLNER QYYQLFLNLL EAQGYAVVPM ENDVLKVVKS
SAAKVEPLPL VGEGSDNYAG DEMVTKVVPV RNVSVRELAP ILRQMIDSAG SGNVVNYDPS
NVIMLTGRAS VVERLTEVIQ RVDHAGNRTE EVIPLDNASA SEIARVLESL TKNSGENQPA
TLKSQIVADE RTNSVIVSGD PATRDKMRRL IRRLDSEMER SGNSQVFYLK YSKAEDLVDV
LKQVSGTLTA AKEEAEGTVG SGREVVSIAA SKHSNALIVT APQDIMQSLQ SVIEQLDIRR
AQVHVEALIV EVAEGSNINF GVQWASKDAG LMQFANGTQI PIGTLGAAIS QAKPQKGSTV
ISENGATTIN PDTNGDLSTL AQLLSGFSGT AVGVVKGDWM ALVQAVKNDS SSNVLSTPSI
TTLDNQEAFF MVGQDVPVLT GSTVGSNNSN PFNTVERKKV GIMLKVTPQI NEGNAVQMVI
EQEVSKVEGQ TSLDVVFGER KLKTTVLAND GELIVLGGLM DDQAGESVAK VPLLGDIPLI
GNLFKSTADK KEKRNLMVFI RPTILRDGMA ADGVSQRKYN YMRAEQIYRD EQGLSLMPHT
AQPVLPAQNQ ALPPEVRAFL NAGRTR
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