Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02836 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 2967565 |
End bp | 2968788 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | hypothetical type II secretion protein GspF |
Protein accession | ACT44640 |
Protein GI | 253978970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000156909 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTGT TTTACTATCA GGCGCTGGAG CGTAATGGTC GCAAAACCAA AGGCATGATT GAGGCGGATT CCGCGCGTCA TGCCCGTCAA TTGTTGCGTG GTAAAGACCT CATTCCCGTG CACATTGAAG CCCGGATGAA TGCATCGGCA GGGGGGATGT TGCAGCGTCG GCGGCACGCA CATCGTCGCG TGGCGGCGGC AGATCTGGCG CTGTTCACAC GCCAACTGGC AACATTAGTA CAGGCAGCAA TGCCGCTGGA AACCTGCTTA CAGGCGGTCA GTGAGCAAAG TGAAAAACTG CATGTAAAAA GCCTCGGAAT GGCGCTGCGC AGCCGGATTC AGGAAGGTTA CACCCTGTCG GACAGCCTGC GCGAACATCC CCGCGTCTTT GATTCTCTGT TTTGTTCGAT GGTTGCTGCC GGTGAAAAAT CCGGGCATCT CGACGTGGTG CTCAATCGCC TGGCGGATTA CACCGAACAG CGACAGCGCC TGAAATCTCG CCTGCTGCAG GCCATGCTTT ATCCGCTGGT ATTGCTGGTG GTGGCAACGG GCGTAGTCAC TATTTTGCTG ACGGCAGTGG TGCCGAAAAT CATCGAACAG TTTGATCATC TCGGACACGC GCTGCCTGCC TCCACCCGCA CGCTCATCGC CATGAGCGAC GCGTTACAGG CCAGCGGCGT GTACTGGCTG GCGGGTTTGC TGGGGCTTCT GGTGCTGGGG CAACGGCTAC TCAAAAATCC TGCGATGCGC CTGCGCTGGG ATAAAACCTT GCTGCGTTTG CCCGTGACGG GGCGTGTTGC GCGCGGACTG AATACGGCGC GTTTTTCCCG CACATTAAGC ATCCTCACCG CCAGCAGTGT TCCGCTGCTG GAAGGCATTC AGACCGCCGC CGCCGTGTCG GCAAATCGTT ATGTCGAACA ACAACTGCTG CTGGCGGCAG ATCGCGTCCG CGAAGGAAGC AGTCTGCGCG CTGCGCTGGC GGAGTTGCGC CTGTTCCCGC CGATGATGCT GTACATGATC GCCTCCGGCG AACAGAGCGG CGAACTGGAA ACCATGCTTG AGCAGGCCGC AGTCAACCAG GAACGGGAAT TTGATACCCA GGTGGGGCTG GCGTTAGGGC TGTTTGAACC GGCGCTGGTG GTGATGATGG CGGGCGTGGT GCTGTTTATC GTCATCGCCA TCCTCGAGCC GATGCTGCAA CTGAACAATA TGGTTGGAAT GTAA
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Protein sequence | MALFYYQALE RNGRKTKGMI EADSARHARQ LLRGKDLIPV HIEARMNASA GGMLQRRRHA HRRVAAADLA LFTRQLATLV QAAMPLETCL QAVSEQSEKL HVKSLGMALR SRIQEGYTLS DSLREHPRVF DSLFCSMVAA GEKSGHLDVV LNRLADYTEQ RQRLKSRLLQ AMLYPLVLLV VATGVVTILL TAVVPKIIEQ FDHLGHALPA STRTLIAMSD ALQASGVYWL AGLLGLLVLG QRLLKNPAMR LRWDKTLLRL PVTGRVARGL NTARFSRTLS ILTASSVPLL EGIQTAAAVS ANRYVEQQLL LAADRVREGS SLRAALAELR LFPPMMLYMI ASGEQSGELE TMLEQAAVNQ EREFDTQVGL ALGLFEPALV VMMAGVVLFI VIAILEPMLQ LNNMVGM
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