Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02630 |
Symbol | rumA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 2746288 |
End bp | 2747589 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | 23S rRNA (uracil-5-)-methyltransferase |
Protein accession | ACT44447 |
Protein GI | 253978777 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00985329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCAAT TCTACTCTGC AAAACGACGC ACGACGACGC GTCAGATCAT AACCGTTTCA GTCAACGACC TCGACTCTTT TGGTCAGGGC GTGGCGCGAC ATAACGGCAA AACGCTATTT ATCCCCGGAT TATTGCCGCA GGAAAACGCG GAAGTTACTG TTACTGAAGA TAAAAAACAG TATGCCCGCG CTAAAGTCGT ACGCCGGTTA AGCGATAGCC CGGAACGCGA AACGCCACGC TGTCCTCATT TTGGCGTATG CGGTGGCTGT CAGCAACAAC ACGCCAGCGT GGATTTACAG CAGCGAAGCA AAAGTGCGGC ACTCGCCCGA TTAATGAAAC ACGATGTCTC TGAAGTGATC GCCGATGTTC CCTGGGGCTA TCGCCGTCGC GCGCGTTTAA GTCTGAACTA CTTACCGAAA ACACAGCAAC TTCAGATGGG GTTTCGCAAA GCGGGCTCCA GTGACATTGT CGACGTCAAA CAATGCCCCA TTTTAGCGCC CCAACTTGAA GCATTGCTGC CCAAAGTCAG GGCATGTCTG GGCAGCTTAC AAGCTATGCG CCATCTTGGT CATGTTGAAC TGGTACAGGC AACCAGCGGC ACGCTGATGA TTTTGCGCCA TACCGCACCG CTAAGTTCGG CAGATCGCGA AAAACTGGAA CGCTTTTCGC ATTCTGAAGG CCTGGATCTG TATCTCGCCC CCGATAGTGA GATACTCGAA ACCGTCTCTG GTGAGATGCC CTGGTATGAC TCAAACGGGT TGCGCTTAAC TTTTAGCCCG CGCGATTTTA TTCAGGTCAA TGCGGGTGTG AACCAAAAAA TGGTAGCGCG TGCGTTGGAA TTGCTGGATG TGCAACCTGA AGATCGCGTA CTGGATCTGT TCTGCGGTAT GGGCAACTTT ACACTGCCAT TGGCGACACA AGCTGCCAGT GTGGTCGGTG TAGAAGGTGT TCCGGCGCTG GTGGAAAAAG GCCAGCAGAA TGCGCGTCTT AATGGCTTAC AGAATGTGAC GTTTTATCAC GAAAATCTTG AAGAAGATGT CACAAAGCAG CCGTGGGCGA AAAACGGCTT CGATAAAGTG TTGCTGGACC CGGCGCGAGC AGGTGCCGCA GGTGTTATGC AGCAAATTAT AAAACTGGAA CCTATTCGTA TAGTTTATGT ATCCTGTAAC CCTGCAACGC TGGCTCGGGA TAGCGAAGCG TTATTAAAAG CAGGATATAC CATTGCGCGA CTGGCGATGC TGGATATGTT CCCACACACG GGACATCTGG AATCGATGGT ACTTTTCTCG CGCGTTAAAT AG
|
Protein sequence | MAQFYSAKRR TTTRQIITVS VNDLDSFGQG VARHNGKTLF IPGLLPQENA EVTVTEDKKQ YARAKVVRRL SDSPERETPR CPHFGVCGGC QQQHASVDLQ QRSKSAALAR LMKHDVSEVI ADVPWGYRRR ARLSLNYLPK TQQLQMGFRK AGSSDIVDVK QCPILAPQLE ALLPKVRACL GSLQAMRHLG HVELVQATSG TLMILRHTAP LSSADREKLE RFSHSEGLDL YLAPDSEILE TVSGEMPWYD SNGLRLTFSP RDFIQVNAGV NQKMVARALE LLDVQPEDRV LDLFCGMGNF TLPLATQAAS VVGVEGVPAL VEKGQQNARL NGLQNVTFYH ENLEEDVTKQ PWAKNGFDKV LLDPARAGAA GVMQQIIKLE PIRIVYVSCN PATLARDSEA LLKAGYTIAR LAMLDMFPHT GHLESMVLFS RVK
|
| |