Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02519 |
Symbol | gabP |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 2634113 |
End bp | 2635513 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | gamma-aminobutyrate transporter |
Protein accession | ACT44338 |
Protein GI | 253978668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAAT CATCGCAACC ACATGAGTTA GGCGGCGGGC TGAAGTCACG CCACGTCACC ATGTTGTCTA TTGCCGGTGT TATCGGCGCA AGTCTGTTTG TCGGTTCCAG CGTCGCCATC GCCGAAGCGG GCCCGGCGGT ATTACTGGCC TATCTGTTCG CCGGATTACT GGTGGTTATG ATTATGCGGA TGTTGGCGGA AATGGCGGTT GCCACGCCCG ATACCGGTTC GTTTTCCACC TATGCCGATA AAGCCATTGG TCGCTGGGCG GGCTATACCA TCGGCTGGTT GTACTGGTGG TTTTGGGTAC TGGTTATCCC ACTGGAAGCC AACATCGCCG CTATGATCCT GCACTCGTGG GTTCCAGGCA TTCCCATCTG GTTATTTTCC CTCGTCATTA CCCTCGCCTT AACTGGCAGT AATTTATTAA GCGTTAAAAA CTACGGCGAA TTTGAGTTCT GGCTGGCACT GTGCAAAGTC ATCGCTATCC TGGCCTTTAT TTTCCTTGGT GCAGTCGCAA TTAGCGGTTT TTACCCGTAT GCCGACGTGA GCGGGATCTC AAGATTGTGG GATAGCGGCG GCTTTATGCC CAACGGCTTC GGTGCGGTAT TAAGCGCGAT GTTGATCACC ATGTTCTCGT TTATGGGCGC AGAAATTGTC ACCATTGCCG CCGCGGAATC CGACACGCCG GAAAAACATA TTGTCCGCGC TACCAACTCG GTTATCTGGC GTATTTCTAT CTTCTATTTG TGCTCTATTT TTGTCGTAGT GGCGTTAATA CCGTGGAATA TGCCGGGGCT GAAAGCCGTT GGTTCTTATC GCTCGGTTCT GGAATTGCTC AATATTCCCC ATGCAAAATT AATCATGGAC TGCGTGATAT TACTTTCCGT AACCAGCTGT CTGAACTCGG CGCTGTATAC CGCGTCAAGG ATGCTCTACT CCTTAAGCCG TCGCGGTGAT GCGCCCGCGG TAATGGGCAA AATCAACCGC AGTAAAACCC CGTATGTGGC GGTGTTACTC TCCACCGGAG CGGCATTTTT AACGGTGGTG GTGAACTATT ACGCACCTGC GAAAGTGTTT AAATTCCTGA TAGACAGCTC CGGTGCTATC GCCCTGCTGG TTTATTTAGT CATCGCCGTT TCACAGTTGC GGATGCGTAA AATTCTGCGA GCAGAAGGAA GCGAAATTCG CTTGCGCATG TGGCTTTACC CGTGGCTCAC CTGGCTGGTA ATAGGCTTTA TTACCTTTGT GTTGGTAGTG ATGCTATTCC GCCCGGCGCA ACAGTTAGAA GTGATCTCTA CCGGCTTATT AGCGATAGGG ATTATCTGTA CCGTGCCGAT TATGGCGCGC TGGAAAAAGC TGGTATTGTG GCAAAAAACA CCCGTTCATA ATACGCGCTG A
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Protein sequence | MGQSSQPHEL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM IMRMLAEMAV ATPDTGSFST YADKAIGRWA GYTIGWLYWW FWVLVIPLEA NIAAMILHSW VPGIPIWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIFLG AVAISGFYPY ADVSGISRLW DSGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP EKHIVRATNS VIWRISIFYL CSIFVVVALI PWNMPGLKAV GSYRSVLELL NIPHAKLIMD CVILLSVTSC LNSALYTASR MLYSLSRRGD APAVMGKINR SKTPYVAVLL STGAAFLTVV VNYYAPAKVF KFLIDSSGAI ALLVYLVIAV SQLRMRKILR AEGSEIRLRM WLYPWLTWLV IGFITFVLVV MLFRPAQQLE VISTGLLAIG IICTVPIMAR WKKLVLWQKT PVHNTR
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