Gene ECD_02519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_02519 
SymbolgabP 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp2634113 
End bp2635513 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content51% 
IMG OID 
Productgamma-aminobutyrate transporter 
Protein accessionACT44338 
Protein GI253978668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAT CATCGCAACC ACATGAGTTA GGCGGCGGGC TGAAGTCACG CCACGTCACC 
ATGTTGTCTA TTGCCGGTGT TATCGGCGCA AGTCTGTTTG TCGGTTCCAG CGTCGCCATC
GCCGAAGCGG GCCCGGCGGT ATTACTGGCC TATCTGTTCG CCGGATTACT GGTGGTTATG
ATTATGCGGA TGTTGGCGGA AATGGCGGTT GCCACGCCCG ATACCGGTTC GTTTTCCACC
TATGCCGATA AAGCCATTGG TCGCTGGGCG GGCTATACCA TCGGCTGGTT GTACTGGTGG
TTTTGGGTAC TGGTTATCCC ACTGGAAGCC AACATCGCCG CTATGATCCT GCACTCGTGG
GTTCCAGGCA TTCCCATCTG GTTATTTTCC CTCGTCATTA CCCTCGCCTT AACTGGCAGT
AATTTATTAA GCGTTAAAAA CTACGGCGAA TTTGAGTTCT GGCTGGCACT GTGCAAAGTC
ATCGCTATCC TGGCCTTTAT TTTCCTTGGT GCAGTCGCAA TTAGCGGTTT TTACCCGTAT
GCCGACGTGA GCGGGATCTC AAGATTGTGG GATAGCGGCG GCTTTATGCC CAACGGCTTC
GGTGCGGTAT TAAGCGCGAT GTTGATCACC ATGTTCTCGT TTATGGGCGC AGAAATTGTC
ACCATTGCCG CCGCGGAATC CGACACGCCG GAAAAACATA TTGTCCGCGC TACCAACTCG
GTTATCTGGC GTATTTCTAT CTTCTATTTG TGCTCTATTT TTGTCGTAGT GGCGTTAATA
CCGTGGAATA TGCCGGGGCT GAAAGCCGTT GGTTCTTATC GCTCGGTTCT GGAATTGCTC
AATATTCCCC ATGCAAAATT AATCATGGAC TGCGTGATAT TACTTTCCGT AACCAGCTGT
CTGAACTCGG CGCTGTATAC CGCGTCAAGG ATGCTCTACT CCTTAAGCCG TCGCGGTGAT
GCGCCCGCGG TAATGGGCAA AATCAACCGC AGTAAAACCC CGTATGTGGC GGTGTTACTC
TCCACCGGAG CGGCATTTTT AACGGTGGTG GTGAACTATT ACGCACCTGC GAAAGTGTTT
AAATTCCTGA TAGACAGCTC CGGTGCTATC GCCCTGCTGG TTTATTTAGT CATCGCCGTT
TCACAGTTGC GGATGCGTAA AATTCTGCGA GCAGAAGGAA GCGAAATTCG CTTGCGCATG
TGGCTTTACC CGTGGCTCAC CTGGCTGGTA ATAGGCTTTA TTACCTTTGT GTTGGTAGTG
ATGCTATTCC GCCCGGCGCA ACAGTTAGAA GTGATCTCTA CCGGCTTATT AGCGATAGGG
ATTATCTGTA CCGTGCCGAT TATGGCGCGC TGGAAAAAGC TGGTATTGTG GCAAAAAACA
CCCGTTCATA ATACGCGCTG A
 
Protein sequence
MGQSSQPHEL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM 
IMRMLAEMAV ATPDTGSFST YADKAIGRWA GYTIGWLYWW FWVLVIPLEA NIAAMILHSW
VPGIPIWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIFLG AVAISGFYPY
ADVSGISRLW DSGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP EKHIVRATNS
VIWRISIFYL CSIFVVVALI PWNMPGLKAV GSYRSVLELL NIPHAKLIMD CVILLSVTSC
LNSALYTASR MLYSLSRRGD APAVMGKINR SKTPYVAVLL STGAAFLTVV VNYYAPAKVF
KFLIDSSGAI ALLVYLVIAV SQLRMRKILR AEGSEIRLRM WLYPWLTWLV IGFITFVLVV
MLFRPAQQLE VISTGLLAIG IICTVPIMAR WKKLVLWQKT PVHNTR