Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02518 |
Symbol | gabT |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 2632522 |
End bp | 2633802 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | 4-aminobutyrate aminotransferase |
Protein accession | ACT44337 |
Protein GI | 253978667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CGATTCCCCG TGGTGTTGGG CAAATTCACC CGATTTTCGC TGACCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC CGTGAGTATC TTGATTTCGC GGGCGGGATT GCGGTGCTCA ATACCGGGCA CTTGCATCCG AAAGTGGTGG CTGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG CTGGCCTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT TTCGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTAAAA ATCGCCCGCG CCGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGG CTGATGCCGG GTCATGTTTA TCGCGCGCTT TATCCTTGCC CGCTGCACGG CATAAGCGAG GATGACGCTA TCGCCAGCAT CCACCGGATC TTCAAAAATG ATGCCGCGCC GGAAGATATC GCCGCCATCG TGATTGAGCC GGTTCAGGGC GAAGGCGGTT TCTACGCCGC GTCGCCAGCC TTTATGCAGC GTTTACGCGC GCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAGAT GGGCGTTGCG CCGGATCTCA CCACCTTTGC GAAATCGATC GCGGGCGGCT TCCCGCTGGC GGGCGTCACC GGGCGCGCGG AAGTGATGGA TGCCGTCGCT CCAGGTGGTC TGGGCGGCAC CTATGCCGGT AACCCGATTG CCTGCGTGGC GGCGCTGGAA GTGTTGAAGG TGTTTGAGCA GGAAAATCTG CTGCAAAAAG CCAACGATCT GGGGCAGAAG CTAAAAGACG GATTGTTAGC GATAGCCGAA AAACACCCGG AGATCGGCGA CGTACGCGGG CTGGGAGCGA TGATCGCCAT CGAGCTGTTT GAAGATGGCG ATCACAGCAA ACCGGACGCA AAACTCACCG CCGGGATCGT GGCGCGCGCC CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT TTTGCTGAGG CGAAGCAGTA G
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Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAASPA FMQRLRALCD EHGIMLIADE VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF EDGDHSKPDA KLTAGIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC FAEAKQ
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