| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02431 |
|---|
| Symbol | hcaF |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 2536195 |
|---|
| End bp | 2536713 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | 3-phenylpropionate dioxygenase, small (beta) subunit |
|---|
| Protein accession | ACT44251 |
|---|
| Protein GI | 253978581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC AAGTTTCACT GGAGTTACAT CACCGCATTA GCCAGTTTCT CTTTCACGAA
GCCAGTCTGC TGGATGACTG GAAATTTCGT GACTGGCTGG CACAGCTCGA CGAAGAGATT
CGTTACACCA TGCGCACCAC GGTTAACGCG CAAACGCGCG ACCGCCGCAA AGGCGTTCAG
CCACCGACGA CCTGGATTTT TAATGACACC AAAGACCAGC TGGAGCGGCG AATCGCCCGT
CTGGAAACGG GCATGGCCTG GGCAGAAGAG CCGCCGTCAC GCACTCGTCA CTTAATCAGC
AACTGCCAGG TAAGCGAAAC CGACATCCCA AATGTATTTG CCGTGAGGGT GAATTATCTA
CTTTATCGGG CACAAAAAGA GCGCGATGAA ACATTCTATG TTGGAACGCG TTTCGACAAA
GTTCGCCGTC TGGAAGATGA CAACTGGCGC TTGCTGGAAC GGGATATCGT CCTGGATCAA
GCGGTAATCA CTTCCCATAA CCTGAGTGTA CTGTTCTGA
|
|---|
| Protein sequence | MSAQVSLELH HRISQFLFHE ASLLDDWKFR DWLAQLDEEI RYTMRTTVNA QTRDRRKGVQ
PPTTWIFNDT KDQLERRIAR LETGMAWAEE PPSRTRHLIS NCQVSETDIP NVFAVRVNYL
LYRAQKERDE TFYVGTRFDK VRRLEDDNWR LLERDIVLDQ AVITSHNLSV LF
|
|---|
| |