| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02294 |
|---|
| Symbol | ypdE |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 2382396 |
|---|
| End bp | 2383433 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | predicted peptidase |
|---|
| Protein accession | ACT44115 |
|---|
| Protein GI | 253978445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT CGCTATTAAA AGCGTTGAGC GAGGCAGATG CGATCGCCTC CTCGGAACAG
GAAGTGCGGC AGATCCTGCT GGAAGAAGCG GATCGCCTGC AAAAAGAAGT GCGATTTGAT
GGTCTGGGAT CGGTGCTGAT CCGCCTGAAT GAATCGACAG GTCCGAAGGT GATGATCTGT
GCGCATATGG ACGAAGTGGG ATTTATGGTG CACAGCATCT CCCGCGAAGG GGCGATTGAT
GTGCTGCCGG TTGGCAACGT ACGCATGGCT GCCCGCCAGC TGCAGCCGGT GCGCATCACC
ACCCGTGAAG AGTGCAAAAT TCCAGGCCTG CTTGACGGCG ACCGGCAGGG GAATGACGTC
AGCGCCATGC GCGTGGACAT TGGTGCGCGC TCCTATGACG AAGTGATGCA GGCGGGAATT
CGTCCCGGCG ATCGCGTCAC GTTTGATACC ACTTTTCAGG TTCTCCCTCA CCAGCGAGTG
ATGGGGAAAG CCTTTGATGA CCGCCTCGGT TGCTATCTGC TGGTGACGTT ACTGCGCGAA
CTGCACGACG CCGAACTACC TGCGGAAGTG TGGCTGGTGG CAAGTTCCAG CGAAGAGGTG
GGATTACGCG GCGGGCAAAC TGCCACCCGC GCGGTGTCGC CGGACGTCGC CATTGTGCTT
GATACCGCCT GCTGGGCGAA AAACTTTGAT TATGGCGCGG CTAACCATCG CCAGATTGGT
AACGGGCCGA TGCTGGTGTT AAGCGACAAG TCGCTGATTG CGCCGCCAAA ACTTACCGCC
TGGGTCGAAA CCGTGGCGGC AGAAATTGGC GTGCCGTTGC AGGCAGATAT GTTCAGCAAC
GGCGGCACGG ATGGCGGGGC GGTGCACTTA ACCGGCACCG GCGTGCCCAC AGTGGTGATG
GGGCCAGCAA CCCGCCATGG ACATTGCGCC GCATCGATTG CCGATTGCCG CGACATTTTG
CAGATGCAGC AACTTTTATC TGCCCTTATT CAACGTCTTA CGCGTGAGAC GGTTGTTCAA
CTGACGGATT TCAGATGA
|
|---|
| Protein sequence | MDLSLLKALS EADAIASSEQ EVRQILLEEA DRLQKEVRFD GLGSVLIRLN ESTGPKVMIC
AHMDEVGFMV HSISREGAID VLPVGNVRMA ARQLQPVRIT TREECKIPGL LDGDRQGNDV
SAMRVDIGAR SYDEVMQAGI RPGDRVTFDT TFQVLPHQRV MGKAFDDRLG CYLLVTLLRE
LHDAELPAEV WLVASSSEEV GLRGGQTATR AVSPDVAIVL DTACWAKNFD YGAANHRQIG
NGPMLVLSDK SLIAPPKLTA WVETVAAEIG VPLQADMFSN GGTDGGAVHL TGTGVPTVVM
GPATRHGHCA ASIADCRDIL QMQQLLSALI QRLTRETVVQ LTDFR
|
|---|
| |