Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02291 |
Symbol | ypdB |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 2378269 |
End bp | 2379003 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | predicted response regulator in two-component system withYpdA |
Protein accession | ACT44112 |
Protein GI | 253978442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGTCA TCATTGTTGA AGACGAATTC CTGGCACAAC AGGAACTGAG CTGGCTAATT AAAGAGCACA GCCAGATGGA GATTGTCGGC ACCTTTGACG ACGGTCTGGA CGTGTTGAAG TTTTTGCAGC ATAACCGCGT CGACGCCATT TTTCTGGATA TCAATATTCC GTCGCTGGAT GGTGTGTTGC TGGCGCAAAA CATCAGCCAG TTCGCCCATA AACCGTTTAT TGTGTTCATC ACCGCGTGGA AAGAACATGC GGTAGAAGCG TTTGAACTGG AGGCGTTTGA CTACATTCTC AAACCGTATC AGGAGTCACG CATTACCGGG ATGCTGCAAA AACTGGAAGC GGCCTGGCAA CAACAGCAGA CCAGCAGCAC GCCTGCCGCG ACGGTAACGC GTGAGAATGA CACCATTAAT CTGGTGAAAG ATGAGCGAAT AATCGTCACG CCAATTAACG ATATCTATTA CGCCGAAGCG CACGAGAAAA TGACCTTTGT CTATACGCGG CGTGAATCCT ACGTAATGCC GATGAACATT ACCGAATTTT GCAGCAAACT GCCGCCGTCG CATTTTTTCC GCTGCCATCG CTCATTTTGT GTCAATCTGA ACAAAATCCG CGAAATCGAA CCGTGGTTTA ATAACACCTA TATTCTGCGG CTGAAAGATC TGGATTTTGA AGTGCCAGTC AGCCGCAGCA AAGTAAAAGA ATTTCGCCAG TTAATGCATC TTTAA
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Protein sequence | MKVIIVEDEF LAQQELSWLI KEHSQMEIVG TFDDGLDVLK FLQHNRVDAI FLDINIPSLD GVLLAQNISQ FAHKPFIVFI TAWKEHAVEA FELEAFDYIL KPYQESRITG MLQKLEAAWQ QQQTSSTPAA TVTRENDTIN LVKDERIIVT PINDIYYAEA HEKMTFVYTR RESYVMPMNI TEFCSKLPPS HFFRCHRSFC VNLNKIREIE PWFNNTYILR LKDLDFEVPV SRSKVKEFRQ LMHL
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