Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02146 |
Symbol | atoS |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 2210404 |
End bp | 2212230 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | sensory histidine kinase in two-component regulatory system with AtoC |
Protein accession | ACT43969 |
Protein GI | 253978299 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATTATA TGAAGTGGAT TTATCCACGC CGCTTACGCA ATCAAATGAT CCTGATGGCA ATCCTGATGG TCATTGTCCC AACGCTTACT ATTGGTTATA TCGTAGAAAC GGAAGGACGT TCAGCAGTCT TATCTGAAAA AGAGAAAAAA CTTTCTGCCG TGGTCAACCT GCTTAATCAG GCGCTAGGCA ATCGCTACGA TCTCTACATC GACTTACCGC GTGAGGAGCG TATCCGCGCA TTAAATGCAG AACTTGCCCC CATTACCGAA AATATCACTC ACGCCTTCCC TGGCATCGGC GCTGGTTATT ACAACAAAAC GCTGGATGCG ATAATCACCT ACGCGCCTTC AGCGCTATAT CAGAATAATG TCGGCGTTAC CATTGCCGCA GATCACCCTG GTCGCGAAGT CATGCGTACA AATACCCCTT TGGTTTATTC AGGCAGGCAG GTGCGCGGCG ATATTTTGAA TTCAATGATC CCCATTGAGC GTAATGGTGA AATCCTCGGC TATATCTGGG CCAATGAATT AACCGAAGAT ATTCGCCGCC AGGCCTGGAA AATGGATGTG AGGATTATCA TTGTGCTCAC CGCCGGTTTG CTGATAAGCC TGCTGTTGAT TGTCCTTTTC TCCCGTCGCC TGAGCGCCAA TATTGATATC ATCACCGATG GCCTCTCGAC TCTGGCACAA AATATTCCCA CTCGATTACC ACAATTGCCC GGTGAAATGG GGCAAATCAG TCAGAGTGTT AATAACCTCG CCCAGGCACT GCGTGAAACG CGGACACTTA ACGATCTGAT TATTGAAAAC GCTGCCGATG GCGTCATTGC CATTGACCGC CAGGGTGATG TAACCACCAT GAACCCAGCA GCAGAAGTTA TCACTGGCTA TCAACGCCAT GAACTGGTAG GGCAGCCTTA CTCCATGTTG TTCGACAATA CTCAGTTCTA CAGTCCAGTA CTGGATACGC TGGAACATGG CACCGAACAT GTGGCGCTGG AGATCAGTTT TCCAGGTCGT GACCGCACCA TTGAACTCAG TGTCACTACC AGTCGTATTC ATAACACGCA CGGTGAAATG ATAGGTGCTT TGGTGATTTT CTCTGATTTA ACTGCCCGCA AAGAAACCCA GCGCCGCATG GCGCAAGCAG AACGCCTCGC CACACTGGGT GAGCTGATGG CTGGCGTCGC GCATGAAGTA CGTAATCCGT TAACGGCTAT TCGTGGTTAT GTACAGATCT TGCGCCAACA AACCAGTGAC CCAATACATC AGGAATATCT GTCCGTAGTA CTCAAAGAAA TCGATTCAAT TAACAAAGTT ATTCAGCAAT TGCTCGAATT TTCACGTCCA CGCCACAGTC AATGGCAACA AGTCAGCCTC AATGCATTGG TTGAAGAAAC TCTGGTACTG GTACAAACCG CCGGCGTACA AGCGCGGGTC GACTTCATAA GCGAACTGGA TAATGAATTA AGCCCGATTA ACGCCGATCG TGAACTGCTC AAACAGGTAC TACTGAATAT CCTGATCAAT GCCGTCCAGG CTATCAGCGC ACGAGGGAAA ATTCGCATTC AAACCTGGCA ATACAGCGAC TCACAACAGG CCATTTCGAT AGAGGACAAC GGCTGTGGCA TTGATCTCTC GCTGCAAAAA AAGATCTTCG ATCCCTTTTT CACCACCAAA GCCTCAGGAA CCGGGCTTGG TCTGGCGTTA AGTCAACGCA TCATTAATGC CCATCAGGGT GATATTCGCG TCGCCAGTTT GCCGGGCTAC GGCGCAACCT TCACGCTTAT TTTACCGATC AACCCGCAGG GAAATCAGAC TGTATGA
|
Protein sequence | MHYMKWIYPR RLRNQMILMA ILMVIVPTLT IGYIVETEGR SAVLSEKEKK LSAVVNLLNQ ALGNRYDLYI DLPREERIRA LNAELAPITE NITHAFPGIG AGYYNKTLDA IITYAPSALY QNNVGVTIAA DHPGREVMRT NTPLVYSGRQ VRGDILNSMI PIERNGEILG YIWANELTED IRRQAWKMDV RIIIVLTAGL LISLLLIVLF SRRLSANIDI ITDGLSTLAQ NIPTRLPQLP GEMGQISQSV NNLAQALRET RTLNDLIIEN AADGVIAIDR QGDVTTMNPA AEVITGYQRH ELVGQPYSML FDNTQFYSPV LDTLEHGTEH VALEISFPGR DRTIELSVTT SRIHNTHGEM IGALVIFSDL TARKETQRRM AQAERLATLG ELMAGVAHEV RNPLTAIRGY VQILRQQTSD PIHQEYLSVV LKEIDSINKV IQQLLEFSRP RHSQWQQVSL NALVEETLVL VQTAGVQARV DFISELDNEL SPINADRELL KQVLLNILIN AVQAISARGK IRIQTWQYSD SQQAISIEDN GCGIDLSLQK KIFDPFFTTK ASGTGLGLAL SQRIINAHQG DIRVASLPGY GATFTLILPI NPQGNQTV
|
| |