Gene ECD_01963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01963 
SymbolwcaC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp2029860 
End bp2031077 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content54% 
IMG OID 
Productpredicted glycosyl transferase 
Protein accessionACT43814 
Protein GI253978144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TGCAATTTAA TGTGCGACTG GCGGAAGGCG GGGCAGCAGG TGTGGCGTTA 
GATCTCCACC AGCGTGCGCT GCAACAGGGG CTGGCGTCAC ATTTTGTGTA CGGTTACGGC
AAAGGCGGCA AAGAGAGTGT CAGCCATCAA AACTATCCGC AGGTCATCAA ACATACGCCG
CGGATGACCG CGATGGCGAA CATTGCCCTG TTTCGTCTGT TTAATCGCGA TCTGTTTGGC
AATTTCAATG AGTTATATCG CACCATTACT CGTACACCGG GTCCGGTGGT CCTGCATTTT
CATGTGCTGC ACAGCTACTG GCTAAATCTT AAGAGCGTGG TGCGCTTTTG CGAAAAGGTG
AAAAACCACA AACCGGATGT CACTCTGGTC TGGACGCTGC ACGACCACTG GAGCGTTACC
GGGCGCTGCG CCTTTACCGA CGGTTGTGAA GGCTGGAAAA CGGGCTGCCA GAAATGCCCG
ACCTTAATTA ATTATCCGCC GGTGAAGATT GATCGCGCAC ACCAGCTGGT GGCGGGCAAA
CGCCAGTTAT TCCGTGAGAT GCTGGCGCTG GGCTGTCAGT TTATTTCCCC CAGCCAGCAT
GTGGCTGACG CTTTCAATAG CCTGTACGGT CCAGGGCGTT GCCGGATTAT CAATAATGGC
ATTGATATGG CAACCGAAGC GATTCTGGCG GACTTGCCTC CGGTGCGCGA AACCCAGGGT
AAGCCGAAAA TCGCGGTGGT GGCGCATGAC CTGCGTTACG ACGGCAAAAC TAACCAGCAA
CTGGTGCGCG AGATGATGGC GCTGGGCGAC AAAATCGAAC TGCATACCTT TGGTAAGTTC
TCGCCGTTCA CCGCTGGCAA CGTGGTTAAT CACGGCTTTG AAACTGACAA GCGCAAGTTG
ATGAGCGCGC TCAATCAGAT GGATGCGCTG GTGTTCAGTT CTCGCGTCGA TAACTACCCG
CTGATTTTGT GTGAGGCGCT ATCGATTGGC GTGCCGGTGA TTGCCACCCA TAGCGATGCG
GCGCGGGAAG TGTTGCAAAA ATCCGGCGGT AAAACCGTCA GCGAAGAAGA GGTGCTGCAA
CTGGTGCAGT TAAGCAAACC GGAAATCGCG CAGGCGATAT TTGGTACCAC GCTGGCTGAG
TTCAGCCAAC GCAGCCGCGC CACCTACAGT GGACAACAGA TGCTGGAGGA GTATGTCAAC
TTCTATCAGA ATCTGTAG
 
Protein sequence
MNILQFNVRL AEGGAAGVAL DLHQRALQQG LASHFVYGYG KGGKESVSHQ NYPQVIKHTP 
RMTAMANIAL FRLFNRDLFG NFNELYRTIT RTPGPVVLHF HVLHSYWLNL KSVVRFCEKV
KNHKPDVTLV WTLHDHWSVT GRCAFTDGCE GWKTGCQKCP TLINYPPVKI DRAHQLVAGK
RQLFREMLAL GCQFISPSQH VADAFNSLYG PGRCRIINNG IDMATEAILA DLPPVRETQG
KPKIAVVAHD LRYDGKTNQQ LVREMMALGD KIELHTFGKF SPFTAGNVVN HGFETDKRKL
MSALNQMDAL VFSSRVDNYP LILCEALSIG VPVIATHSDA AREVLQKSGG KTVSEEEVLQ
LVQLSKPEIA QAIFGTTLAE FSQRSRATYS GQQMLEEYVN FYQNL