Gene ECD_01947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01947 
SymbolrfbB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp2011008 
End bp2012093 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content44% 
IMG OID 
ProductdTDP-glucose 4,6 dehydratase, NAD(P)-binding 
Protein accessionACT43798 
Protein GI253978128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATAC TTGTTACTGG TGGCGCAGGA TTTATTGGTT CTGCTGTTGT TCGTCACATA 
ATAAATAATA CGCAAGATAG TGTTGTTAAT GTCGATAAAT TAACATACGC CGGAAACCTG
GAATCACTCG CTGAAATTTC TGATTCTGAA CGTTATTCAT TTGAGCATGC AGATATCTGC
GATGCCGAAG CGATGGCTCG TATTTTCGCA CAGCACCAGC CAGACGCGGT GATGCACCTG
GCAGCAGAGA GCCACGTTGA CCGCTCAATA ACTGGCCCTG CGGCATTTAT TGAAACCAAT
ATTGTGGGTA CTTATGTTCT TTTAGAAGCG GCGCGCAATT ATTGGTCTGG TCTGGATGAT
GAAAAGAAAA AAAACTTCCG TTTTCATCAT ATTTCTACTG ATGAGGTGTA TGGTGACTTA
CCCCATCCGG ATGAAGTAAA TAGCAATGAA ACGTTGCAGC TATTTACGGA AACGACAGCA
TACGCGCCAA GTAGTCCATA TTCTGCTTCT AAAGCTTCCA GCGATCATTT GGTTCGCGCA
TGGAAACGTA CTTATGGTTT ACCGACCATT GTGACTAATT GCTCGAACAA CTATGGTCCT
TATCATTTCC CGGAAAAGCT TATTCCACTG GTTATTCTTA ATGCACTGGA AGGTAAGGCA
TTACCTATTT ATGGCAAAGG AGATCAGATC CGCGACTGGT TGTATGTAGA GGATCATGCT
CGAGCGTTAT ATACCGTCGT AACCGAAGGT AAAGCGGGCG AAACTTATAA CATTGGTGGA
CACAACGAAA AGAAAAACAT CGACGTAGTG TTCACTATTT GTGATTTGTT GGATGAGATA
GTCCCGAAAG AGAAATCTTA TCGTGAGCAA ATTACCTATG TTGCTGATCG CCCAGGGCAT
GATCGCCGTT ATGCAATTGA TGCCGATAAA ATTAGCCGCG AATTGGGCTG GAAACCGCAA
GAAACGTTTG AGAGCGGTAT TCGTAAAACG GTGGAATGGT ATCTGGCTAA TACAAATTGG
GTTGAGAATG TGAAAAGCGG TGCTTATCAG TCGTGGATTG AACAGAACTA TGAGGGCCGC
CAGTAA
 
Protein sequence
MKILVTGGAG FIGSAVVRHI INNTQDSVVN VDKLTYAGNL ESLAEISDSE RYSFEHADIC 
DAEAMARIFA QHQPDAVMHL AAESHVDRSI TGPAAFIETN IVGTYVLLEA ARNYWSGLDD
EKKKNFRFHH ISTDEVYGDL PHPDEVNSNE TLQLFTETTA YAPSSPYSAS KASSDHLVRA
WKRTYGLPTI VTNCSNNYGP YHFPEKLIPL VILNALEGKA LPIYGKGDQI RDWLYVEDHA
RALYTVVTEG KAGETYNIGG HNEKKNIDVV FTICDLLDEI VPKEKSYREQ ITYVADRPGH
DRRYAIDADK ISRELGWKPQ ETFESGIRKT VEWYLANTNW VENVKSGAYQ SWIEQNYEGR
Q