Gene ECD_01893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01893 
SymbolshiA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1958790 
End bp1960106 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID 
Productshikimate transporter 
Protein accessionACT43746 
Protein GI253978076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTCCA CGCTCATCTC CACTCGTCCC GATGAAGGGA CGCTTTCGTT AAGTCGCGCC 
CGACGAGCTG CGTTAGGCAG CTTCGCTGGT GCCGTCGTCG ACTGGTATGA TTTTTTACTC
TATGGCATCA CCGCCGCACT GGTGTTTAAT CGCGAGTTTT TCCCGCAAGT AAGCCCGGCG
ATGGGAACGC TCGCCGCATT TGCTACCTTT GGCGTCGGAT TTCTTTTCCG TCCGCTCGGC
GGTGTCATTT TCGGTCACTT TGGCGACCGA CTGGGACGTA AGCGCATGTT AATGCTGACC
GTCTGGATGA TGGGCATCGC GACAGCCTTG ATTGGTATTC TTCCTTCATT CTCGACCATT
GGGTGGTGGG CACCTATTTT GCTGGTGACA CTGCGTGCCA TTCAGGGATT TGCAGTCGGC
GGCGAATGGG GAGGCGCGGC GTTGCTTTCC GTTGAAAGTG CACCGAAAAA TAAAAAAGCC
TTTTACAGTA GCGGTGTACA AGTTGGCTAC GGTGTAGGTT TACTGCTTTC AACCGGACTG
GTTTCATTGA TCAGTATGAT GACGACTGAC GAACAGTTTT TAAGCTGGGG CTGGCGCATT
CCTTTCCTGT TTAGCATCGT ACTGGTACTG GGAGCATTGT GGGTGCGCAA TGGCATGGAG
GAGTCCGCGG AATTTGAACA ACAGCAACAT TATCAAGCTG CCGCGAAAAA ACGCATCCCG
GTTATCGAAG CGCTGTTACG ACATCCCGGT GCTTTCCTGA AGATTATTGC GCTACGACTG
TGCGAATTGC TGACGATGTA CATCGTTACT GCCTTTGCAC TTAATTATTC AACCCAGAAT
ATGGGGCTAC CGCGCGAACT TTTCCTTAAT ATTGGTTTGC TGGTAGGTGG ATTAAGCTGC
CTGACAATTC CCTGTTTTGC CTGGCTTGCC GATCGTTTTG GTCGCCGTAG GGTTTATATC
ACAGGTACGT TAATCGGAAC GTTGAGCGCA TTTCCTTTCT TTATGGCGCT TGAAGCACAA
TCTATTTTCT GGATAGTTTT CTTCTCCATA ATGCTGGCAA ACATTGCGCA TGACATGGTG
GTGTGTGTGC AACAACCGAT GTTTACCGAA ATGTTTGGTG CCAGTTATCG CTATAGTGGC
GCTGGAGTCG GTTATCAGGT TGCCAGTGTG GTTGGCGGTG GATTTACACC TTTTATTGCC
GCTGCACTCA TCACTTACTT TGCCGGGAAC TGGCATAGCG TCGCCATTTA TTTGCTGGCT
GGATGCCTGA TTTCCGCAAT GACCGCTTTG TTGATGAAAG ACAGTCAACG CGCTTGA
 
Protein sequence
MDSTLISTRP DEGTLSLSRA RRAALGSFAG AVVDWYDFLL YGITAALVFN REFFPQVSPA 
MGTLAAFATF GVGFLFRPLG GVIFGHFGDR LGRKRMLMLT VWMMGIATAL IGILPSFSTI
GWWAPILLVT LRAIQGFAVG GEWGGAALLS VESAPKNKKA FYSSGVQVGY GVGLLLSTGL
VSLISMMTTD EQFLSWGWRI PFLFSIVLVL GALWVRNGME ESAEFEQQQH YQAAAKKRIP
VIEALLRHPG AFLKIIALRL CELLTMYIVT AFALNYSTQN MGLPRELFLN IGLLVGGLSC
LTIPCFAWLA DRFGRRRVYI TGTLIGTLSA FPFFMALEAQ SIFWIVFFSI MLANIAHDMV
VCVQQPMFTE MFGASYRYSG AGVGYQVASV VGGGFTPFIA AALITYFAGN WHSVAIYLLA
GCLISAMTAL LMKDSQRA