Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01597 |
Symbol | rnfA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1650963 |
End bp | 1651544 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | ACT43455 |
Protein GI | 253977785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000885319 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACT ACCTGTTACT GTTTGTCGGA ACTGTACTGG TCAATAACTT TGTACTGGTC AAGTTTCTCG GTCTCTGTCC GTTTATGGGG GTTTCCAAAA AACTGGAAAC CGCGATGGGC ATGGGGCTGG CAACAACGTT TGTGATGACG CTGGCGTCTA TTTGCGCCTG GCTTATCGAT ACGTGGATTT TGATCCCACT TAATCTGATT TACCTGCGCA CCCTGGCATT TATTCTGGTG ATTGCTGTGG TCGTGCAGTT CACCGAGATG GTGGTGCGCA AAACCAGCCC GGTGCTTTAC CGTCTGCTGG GGATTTTTTT GCCGCTTATC ACCACCAACT GTGCAGTGCT CGGCGTGGCG TTGCTGAATA TCAATCTCGG GCACAATTTC TTGCAGTCGG CGCTGTACGG TTTTTCCGCC GCTGTCGGTT TCTCGCTGGT GATGGTGCTC TTCGCCGCCA TCCGCGAACG CCTTGCTGTG GCTGATGTCC CGGCACCTTT TCGCGGTAAT GCCATTGCGT TAATTACCGC AGGTCTTATG TCTCTGGCCT TTATGGGCTT TAGTGGTTTG GTGAAGTTGT AA
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Protein sequence | MTDYLLLFVG TVLVNNFVLV KFLGLCPFMG VSKKLETAMG MGLATTFVMT LASICAWLID TWILIPLNLI YLRTLAFILV IAVVVQFTEM VVRKTSPVLY RLLGIFLPLI TTNCAVLGVA LLNINLGHNF LQSALYGFSA AVGFSLVMVL FAAIRERLAV ADVPAPFRGN AIALITAGLM SLAFMGFSGL VKL
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