| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01461 |
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| Symbol | ydeR |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 1543274 |
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| End bp | 1543777 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted fimbrial-like adhesin protein |
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| Protein accession | ACT43343 |
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| Protein GI | 253977673 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAC TTCACAAGAG GTTCCTGTTA GCTACGTTTT GCGCGTTATT CACAGCAACT
CTCCAGGCCG CCGATGTCAC TATCACTGTT AATGGTCGGG TAGTCGCTAA ACCCTGCACT
ATTCAAACCA AAGAAGCTAA CGTTAATCTC GGGGATCTTT ATACGCGCAA TCTGCAACAA
CCTGGTTCTG CATCTGGCTG GCACAATATT ACTTTGTCAT TAACCGATTG TCCGGTTGAA
ACAAGTGCAG TGACGGCAAT CGTGACAGGT TCAACTGACA ATACGGGTTA TTACAAAAAT
GAAGGTACTG CCGAAAATAT TCAGATAGAG CTGAGGGATG ACCAGGATGC TGCGTTAAAA
AATGGCGATA GCAAAACGGT TATTGTTGAT GAGATCACTC GTAATGCACA GTTTCCACTT
AAGGCAAGAG CTATCACGGT GAATGGAAAC GCAAGCCAGG GAACGATCGA GGCGCTAATC
AATGTGATCT ACACCTGGCA ATAA
|
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| Protein sequence | MKRLHKRFLL ATFCALFTAT LQAADVTITV NGRVVAKPCT IQTKEANVNL GDLYTRNLQQ
PGSASGWHNI TLSLTDCPVE TSAVTAIVTG STDNTGYYKN EGTAENIQIE LRDDQDAALK
NGDSKTVIVD EITRNAQFPL KARAITVNGN ASQGTIEALI NVIYTWQ
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