Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01444 |
Symbol | yddR |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 1515375 |
End bp | 1516397 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | D-ala-D-ala transporter subunit |
Protein accession | ACT43326 |
Protein GI | 253977656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.982069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTTCT GGAGTATTTT ACGCCAACGC TGCTGGGGGC TGGTGCTCGT GGTGGCGGGC GTCTGCGTGA TTACGTTTAT TATCTCGCAT CTGATCCCTG GTGATCCGGC GCGGTTACTG GCGGGTGACC GCGCCAGCGA TGCTATCGTG GAAAATATTC GCCAGCAACT GGGACTGGAC CAGCCACTGT ATGTACAGTT TTACCGCTAC GTCAGCGACC TGTTTCATGG TGACCTGGGA ACATCCATTC GTACCGGGCG TCCGGTGCTG GAAGAGTTGC GTATATTTTT CCCGGCGACG CTGGAACTGG CTTTTTGTGC CCTGCTGCTG GCACTCCTGA TTGGCATCCC GCTGGGCATA CTCTCTGCAG TCTGGCGAAA TCGCTGGCTG GATCATCTGG TGCGAATAAT GGCCATTACC GGAATCTCCA CACCTGCGTT CTGGCTTGGA CTGGGCGTCA TTGTGCTGTT TTATGGTCAT CTGCAAATTC TTCCCGGCGG CGGAAGGCTT GATGACTGGC TGGATCCACC AACGCACGTT ACCGGCTTTT ATCTGCTCGA TGCGCTGCTT GAAGGCAACG GTGAAGTCTT CTTCAATGCG TTGCAACATC TCATCTTACC GGCATTAACG CTGGCGTTCG TTCACCTGGG AATTGTCGCT CGCCAGATCC GCTCAGCGAT GCTGGAACAA TTGAGTGAAG ACTACATTCG TACCGCCCGG GCCAGCGGCT TGCCCGGCTG GTATATCGTT TTATGTTATG CGCTACCCAA TGCGTTGATC CCATCGATTA CCGTATTGGG TCTGGCGCTG GGCGATTTGT TGTATGGCGC AGTGCTCACC GAAACCGTTT TTGCCTGGCC CGGAATGGGT GCATGGGTAG TAACATCAAT ACAGGCGCTC GACTTCCCGG CAGTGATGGG CTTTGCCGTC GTGGTTTCAT TTGCTTATGT GCTGGTCAAC CTGGTGGTGG ATTTGCTCTA TTTGTGGATT GATCCGCGTA TCGGACGTGG AGGTGGTGAA TGA
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Protein sequence | MTFWSILRQR CWGLVLVVAG VCVITFIISH LIPGDPARLL AGDRASDAIV ENIRQQLGLD QPLYVQFYRY VSDLFHGDLG TSIRTGRPVL EELRIFFPAT LELAFCALLL ALLIGIPLGI LSAVWRNRWL DHLVRIMAIT GISTPAFWLG LGVIVLFYGH LQILPGGGRL DDWLDPPTHV TGFYLLDALL EGNGEVFFNA LQHLILPALT LAFVHLGIVA RQIRSAMLEQ LSEDYIRTAR ASGLPGWYIV LCYALPNALI PSITVLGLAL GDLLYGAVLT ETVFAWPGMG AWVVTSIQAL DFPAVMGFAV VVSFAYVLVN LVVDLLYLWI DPRIGRGGGE
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