Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01408 |
Symbol | yncD |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 1475026 |
End bp | 1477128 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | predicted iron outer membrane transporter |
Protein accession | ACT43291 |
Protein GI | 253977621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTT TTTCCGTCCG ACAGACCGTT TTGCCCGCAC TACTTGCCCT TTCCCCCGTT GTTTTTGCCG CTGATGAACA AACCATGATT GTCAGTGCCG CACCGCAGGT GGTTTCCGAG CTGGATACGC CAGCAGCAGT AAGCGTGGTG GATGGCGAGG AGATGCGCCT GGCAACACCG CGCATTAACT TGTCCGAATC ACTGACCAGC GTGCCTGGTT TGCAGGTACA AAATCGGCAG AACTATGCGC AAGATTTACA GCTGTCGATT CGCGGATTTG GCTCCCGCTC CACTTACGGA ATTCGCGGTA TTCGCCTGTA TGTGGACGGT ATTCCCGCCA CCATGCCCGA CGGGCAAGGG CAAACATCCA ACATCGATTT AAGCAGTGTG CAAAATGTGG AAGTGCTGCG TGGCCCCTTT TCTGCCCTGT ATGGCAACGC GTCTGGCGGT GTAATGAATG TCACCACCCA GACCGGACAA CAGCCACCAA CCATTGAAGC CAGTAGTTAC TACGGCAGTT TTGGCAGCTG GCGCTATGGG CTGAAAGCAA CGGGCGCAAC GGGAGACGGC ACACAACCCG GCGATGTTGA TTACACCGTC TCAACCACGC GTTTTACGAC CCACGGCTAT CGTGACCATA GTGGCGCACA GAAAAATTTA GCCAATGCCA AACTGGGCGT ACGCATTGAT GAAGCCAGCA AATTAAGCCT GATTTTCAAT AGTGTGGATA TCAAAGCAGA TGACCCAGGT GGGCTAACCA AAGCAGAATG GAAGGCGAAT CCACAACAAG CGCCTCGTGC AGAACAGTAC GACACGCGAA AAACCATCAA GCAAACTCAG GCTGGGTTGC GCTATGAACG TAGCCTGAGT TCGCGGGATG ATATGAGTGT GATGATGTAT GCCGGAGAGC GAGAAACGAC CCAGTACCAG TCAATACCCA TGGCACCACA ACTTAACCCG TCACATGCGG GCGGCGTGAT TACCCTGCAA CGCCATTACC AGGGAATAGA CAGCCGCTGG ACACACCGTG GTGAACTGGG CGTTCCGGTC ACGTTCACTA CCGGCCTGAA CTACGAAAAC ATGAGTGAAA ACCGCAAGGG CTACAATAAC TTCCGCCTGA ATAGCGGCAT GCCGGAGTAC GGGCAAAAAG GTGAGTTGCG TCGCGACGAA CGCAATCTGA TGTGGAACAT CGATCCCTAT TTACAGACGC AGTGGCAGCT GAGCGAAAAA CTGTCGCTGG ATGCTGACGT GCGCTACAGC TCCGTGTGGT TTGATTCCAA CGACCATTAC GTTACTCCGG GTAACGGCGA TGACAGCGGT GATGCCAGTT ATCATAAATG GCTACCTGCC GGTTCGTTAA AATATGCAAT GACCGATGCC TGGAATATCT ATCTGGCAGC CGGGCGAGGT TTTGAAACGC CGACGATTAA TGAGCTGTCT TATCGTGCTG ATGGGCAAAG CGGTATGAAC TTAGGTTTAA AACCATCCAC CAACGATACA ATTGAGATCG GCAGTAAAAC GCGTATTGGT GATGGGCTGC TTAGTCTCGC ATTGTTTCAG ACCGACACTG ATGATGAAAT TGTTGTCGAT AGCAGTAGCG GTGGGCGTAC GACTTACAAA AATGCCGGAA AGACCCGTCG TCAAGGCGCT GAACTGGCAT GGGATCAACG TTTCGCAGGA GATTTTCGCG TAAACGCGTC CTGGACCTGG CTTGATGCGA CCTATCGCAG CAATGTTTGC AATGAACAGG ATTGTAACGG TAATCGGATG CCAGGGATCG CCCGTAATAT GGGCTTTGCG TCGATAGGTT ATGTACCGGA AGATGGTTGG TATGCAGGCA CGGAAGCGCG TTATATGGGC GATATTATGG CAGATGATGA AAATACGGCA AAAGCGCCGT CTTATACTCT CGTCGGCTTA TTCACCGGGT ATAAATACAA TTACCACAAT TTAACTGTGG ATTTATTTGG TCGTGTCGAT AATTTATTCG ATAAAGAATA CGTTGGTTCT GTCATTGTCA ATGAGTCAAA CGGGCGATAT TACGAACCTT CGCCCGGACG AAATTATGGT GTCGGCATGA ATATTGCGTG GAGATTTGAG TAA
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Protein sequence | MKIFSVRQTV LPALLALSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP RINLSESLTS VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG QTSNIDLSSV QNVEVLRGPF SALYGNASGG VMNVTTQTGQ QPPTIEASSY YGSFGSWRYG LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID EASKLSLIFN SVDIKADDPG GLTKAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS SRDDMSVMMY AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THRGELGVPV TFTTGLNYEN MSENRKGYNN FRLNSGMPEY GQKGELRRDE RNLMWNIDPY LQTQWQLSEK LSLDADVRYS SVWFDSNDHY VTPGNGDDSG DASYHKWLPA GSLKYAMTDA WNIYLAAGRG FETPTINELS YRADGQSGMN LGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK NAGKTRRQGA ELAWDQRFAG DFRVNASWTW LDATYRSNVC NEQDCNGNRM PGIARNMGFA SIGYVPEDGW YAGTEARYMG DIMADDENTA KAPSYTLVGL FTGYKYNYHN LTVDLFGRVD NLFDKEYVGS VIVNESNGRY YEPSPGRNYG VGMNIAWRFE
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