Gene ECD_01400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01400 
SymbolydcV 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1468825 
End bp1469619 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content54% 
IMG OID 
Productpredicted spermidine/putrescine transporter subunit 
Protein accessionACT43283 
Protein GI253977613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCTG AACGCGCACC GTTTTTCCTC AAACTGGCGG CCTGGGGCGG CGTTGTTTTC 
CTACATTTTC CCATCCTGAT AATCGCCGCC TATGCGTTTA ACACTGAAGA TGCGGCGTTT
AGTTTTCCAC CGCAGGGCCT GACGCTGCGC TGGTTTAGCG TGGCAGCACA GCGTAGTGAT
ATTCTTGATG CCGTGACACT GTCACTTAAA GTGGCGGCGC TGGCGACATT AATTGCGCTG
GTGTTAGGGA CGCTGGCAGC TGCCGCGCTG TGGCGACGAG ACTTTTTCGG CAAAAACGCC
ATTTCGCTGT TACTGCTGCT GCCCATTGCG CTGCCGGGCA TTGTCACTGG TCTGGCGTTA
TTAACCGCCT TTAAAACCAT CAATCTGGAG CCGGGATTTT TCACCATCGT GGTCGGTCAT
GCGACTTTTT GTGTAGTTGT GGTGTTTAAC AATGTCATCG CCCGTTTTCG CCGCACCTCC
TGGAGTCTGG TTGAGGCGTC AATGGATCTT GGGGCCAATG GCTGGCAAAC CTTCCGCTAC
GTAGTGTTGC CGAATCTCAG TTCGGCGTTA CTGGCAGGAG GAATGCTGGC GTTTGCCTTG
TCGTTCGATG AAATCATCGT TACGACCTTT ACGGCAGGTC ATGAACGAAC GTTACCGTTG
TGGTTGCTCA ATCAGCTTGG GCGACCGCGT GATGTACCGG TAACTAACGT GGTGGCACTG
CTGGTTATGT TGGTAACAAC CTTGCCGATC CTGGGGGCCT GGTGGCTAAC CCGCGAAGGC
GACAATGGTC AATAA
 
Protein sequence
MHSERAPFFL KLAAWGGVVF LHFPILIIAA YAFNTEDAAF SFPPQGLTLR WFSVAAQRSD 
ILDAVTLSLK VAALATLIAL VLGTLAAAAL WRRDFFGKNA ISLLLLLPIA LPGIVTGLAL
LTAFKTINLE PGFFTIVVGH ATFCVVVVFN NVIARFRRTS WSLVEASMDL GANGWQTFRY
VVLPNLSSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPL WLLNQLGRPR DVPVTNVVAL
LVMLVTTLPI LGAWWLTREG DNGQ