| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01368 |
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| Symbol | hrpA |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | + |
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| Start bp | 1436402 |
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| End bp | 1440247 |
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| Gene Length | 3846 bp |
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| Protein Length | 1281 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | ATP-dependent helicase |
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| Protein accession | ACT43252 |
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| Protein GI | 253977582 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.957415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCG ACAGACTGCG TTTTTCTCGC CGTCTGCACG GTGTTAAGAA GGTTAAAAAT
CCTGATGCAC AACAGGCCAT TTTCCAGGAG ATGGCGAAAG AGATTGACCA GGCGGCAGGG
AAAGTCCTGC TGCGTGAAGC GGCACGACCG GAAATTACTT ATCCTGACAA TTTACCGGTT
AGTCAGAAAA AACAGGACAT TCTCGAAGCG ATTCGTGATC ACCAGGTGGT GATCGTCGCC
GGGGAAACGG GTTCTGGTAA AACGACTCAG TTACCGAAAA TCTGTATGGA GCTGGGGCGC
GGGATTAAAG GGCTGATCGG CCATACCCAG CCGCGTCGCC TGGCGGCAAG AACGGTGGCG
AACCGTATTG CGGAAGAGCT GAAAACGGAG CCGGGCGGTT GCATCGGTTA CAAAGTGCGT
TTCAGCAATC ACGTAAGTGA TAACACGATG GTCAAGCTGA TGACCGACGG TATCCTGCTG
GCGGAGATCC AGCAAGACCG CCTGCTGATG CAGTACGACA CCATCATTAT TGACGAAGCG
CACGAACGCA GCCTGAATAT CGATTTTCTG CTCGGCTATT TGAAAGAGTT GCTGCCGCGG
CGTCCTGACC TAAAAATCAT TATCACTTCC GCGACTATCG ACCCGGAACG CTTTTCGCGC
CACTTTAATA ATGCGCCGAT TATCGAAGTC TCCGGTCGGA CCTATCCGGT GGAAGTGCGC
TATCGACCGA TTGTTGAAGA AGCCGATGAC ACCGAGCGCG ATCAGTTGCA GGCGATTTTT
GACGCCGTAG ACGAACTGAG CCAGGAAAGC CCTGGCGACA TTCTGATCTT TATGAGTGGT
GAGCGGGAAA TTCGCGATAC CGCCGATGCG CTGAACAAGC TGAACTTACG CCATACCGAA
ATCTTGCCGC TTTATGCGCG GCTTTCGAAC AGCGAACAGA ACCGCGTGTT CCAGTCGCAC
AGCGGACGGC GCATTGTGCT GGCGACCAAC GTCGCGGAAA CCTCGCTGAC CGTACCGGGG
ATTAAATACG TCATCGACCC CGGTACAGCG CGTATCAGCC GCTACAGCTA TCGCACCAAA
GTGCAGCGTT TGCCGATTGA ACCCATTTCG CAGGCGTCTG CCAATCAGCG TAAAGGCCGC
TGTGGTCGTG TGTCCGAAGG GATCTGTATT CGTCTCTATT CCGAAGACGA TTTCCTCTCG
CGCCCGGAGT TTACCGATCC GGAGATTCTG CGTACCAACC TGGCCTCGGT TATTTTGCAG
ATGACCGCGC TGGGGCTGGG CGATATCGCT GCGTTCCCGT TTGTCGAAGC ACCGGATAAA
CGCAATATCC AGGATGGCGT GCGTCTGCTC GAAGAACTGG GCGCGATCAC CACGGATGAA
CAGGCCAGCG CCTATAAACT GACGCCGCTC GGTCGCCAGC TCTCGCAGTT GCCTGTCGAC
CCACGTCTGG CGCGTATGGT GCTGGAAGCG CAAAAACATG GCTGCGTGCG TGAGGCGATG
ATTATCACGT CCGCGCTCTC CATTCAGGAT CCGCGCGAAC GTCCGATGGA CAAACAGCAG
GCATCGGACG AAAAACATCG TCGCTTCCAC GACAAAGAAT CCGACTTCCT CGCGTTTGTA
AATCTGTGGA ATTATCTTGG CGAGCAGCAA AAGGCGCTTT CTTCCAACGC CTTCCGTCGC
CTGTGTCGTA CCGATTACCT CAACTATCTG CGCGTGCGCG AATGGCAGGA TATCTACACC
CAGTTGCGTC AGGTGGTGAA AGAACTTGGC ATTCCGGTTA ACAGCGAACC GGCGGAGTAT
CGCGAAATTC ACATTGCGTT GCTGACGGGT TTACTTTCCC ATATCGGCAT GAAAGATGCC
GATAAACAAG AATATACCGG CGCACGTAAC GCGCGTTTCT CCATCTTCCC CGGTTCTGGT
TTATTCAAAA AACCGCCGAA ATGGGTAATG GTGGCGGAAC TGGTAGAAAC CAGCCGCCTG
TGGGGGCGCA TTGCTGCGCG TATCGACCCG GAATGGGTGG AGCCTGTCGC TCAGCATTTG
ATTAAACGTA CCTACAGCGA ACCGCACTGG GAACGGGCGC AGGGCGCGGT GATGGCAACG
GAAAAAGTCA CTGTTTATGG TTTGCCGATT GTTGCCGCGC GCAAGGTCAA CTACAGCCAG
ATCGATCCGG CGTTATGTCG TGAACTCTTT ATTCGCCATG CGCTGGTGGA AGGTGACTGG
CAGACGCGTC ACGCATTCTT CCGTGAAAAC CTGAAACTGC GGGCCGAAGT GGAAGAGCTG
GAACACAAAT CACGTCGCCG CGATATTCTG GTTGATGACG AAACGTTGTT TGAGTTCTAC
GACCAGCGCA TCAGCCACGA TGTAATCTCC GCTCGTCACT TCGATAGCTG GTGGAAAAAA
GTCAGCCGCG AAACGCCTGA TTTGCTCAAC TTTGAAAAGA GCATGTTGAT CAAAGAAGGG
GCGGAAAAAA TCAGCAAGCT GGATTACCCG AACTTCTGGC ATCAGGGCAA TCTCAAGCTG
CGTTTGAGCT ATCAGTTTGA GCCAGGCGCA GACGCGGACG GTGTGACCGT ACATATTCCG
CTGCCGTTAC TTAACCAGGT TGAGGAAAGC GGGTTTGAAT GGCAGATCCC CGGTCTGCGC
CGCGAATTGG TGATTGCTCT GATTAAATCG TTGCCGAAAC CGGTACGCCG TAATTTTGTG
CCTGCACCAA ACTACGCCGA AGCGTTTTTA GGCCGCGTCA CACCGCTGGA GTTACCGTTG
CTCGACAGCC TTGAGCGCGA GTTACGGCGG ATGACCGGCG TTACCGTTGA CCGCGAAGAC
TGGCACTGGG ATCAGGTGCC CGATCACCTG AAAATCACCT TCCGCGTGGT GGATGACAAA
AACAAGAAGC TAAAAGAAGG GCGCTCGCTA CAAGATCTGA AAGATGCGCT GAAAGGCAAA
GTGCAGGAAA CGCTGTCTGC GGTGGCGGAT GACGGTATCG AGCAGAGCGG GCTGCATATC
TGGAGTTTTG GTCAGCTGCC GGAAAGCTAC GAACAGAAGC GTGGCAACTA CAAAGTGAAG
GCGTGGCCAG CGCTAGTGGA TGAACGCGAC AGTGTGGCGA TCAAACTGTT TGATAATCCG
CTAGAGCAAA AACAGGCAAT GTGGAACGGT CTTCGCCGTC TACTGCTGCT GAATATTCCC
TCGCCGATCA AGTATTTACA TGAGAAGTTA CCAAACAAAG CCAAGCTGGG GCTGTACTTT
AACCCGTATG GCAAAGTGCT GGAGCTGATC GACGACTGTA TCTCCTGCGG TGTGGATAAA
TTGATCGACG CCAATGGTGG CCCGGTCTGG ACGGAAGAAG GCTTTGCTGC GCTGCATGAA
AAAGTGCGTG CCGAACTGAA CGACACGGTG GTGGATATTG CGAAGCAGGT CGAGCAAATC
CTTACGGCAG TGTTCAATAT CAACAAACGT CTGAAAGGGC GGGTGGATAT GACCATGGCG
CTGGGGCTTT CTGACATTAA AGCGCAGATG GGCGGGTTGG TATATCGCGG TTTTGTCACT
GGTAACGGCT TCAAACGGCT GGGCGACACG CTGCGATATT TGCAGGCGAT TGAAAAACGA
CTGGAAAAAC TGGCGGTTGA TCCACATCGC GACCGTGCTC AGATGCTGAA AGTCGAAAAC
GTCCAGCAGG CGTGGCAGCA ATGGATCAAC AAACTGCCGC CTGCACGTCG TGAGGATGAA
GACGTGAAAG AGATCCGTTG GATGATAGAA GAGCTGCGCG TTAGTTACTT CGCTCAACAA
CTTGGTACGC CTTATCCGAT TTCAGATAAG CGTATTTTGC AGGCGATGGA GCAGATTAGC
GGTTAA
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| Protein sequence | MLRDRLRFSR RLHGVKKVKN PDAQQAIFQE MAKEIDQAAG KVLLREAARP EITYPDNLPV
SQKKQDILEA IRDHQVVIVA GETGSGKTTQ LPKICMELGR GIKGLIGHTQ PRRLAARTVA
NRIAEELKTE PGGCIGYKVR FSNHVSDNTM VKLMTDGILL AEIQQDRLLM QYDTIIIDEA
HERSLNIDFL LGYLKELLPR RPDLKIIITS ATIDPERFSR HFNNAPIIEV SGRTYPVEVR
YRPIVEEADD TERDQLQAIF DAVDELSQES PGDILIFMSG EREIRDTADA LNKLNLRHTE
ILPLYARLSN SEQNRVFQSH SGRRIVLATN VAETSLTVPG IKYVIDPGTA RISRYSYRTK
VQRLPIEPIS QASANQRKGR CGRVSEGICI RLYSEDDFLS RPEFTDPEIL RTNLASVILQ
MTALGLGDIA AFPFVEAPDK RNIQDGVRLL EELGAITTDE QASAYKLTPL GRQLSQLPVD
PRLARMVLEA QKHGCVREAM IITSALSIQD PRERPMDKQQ ASDEKHRRFH DKESDFLAFV
NLWNYLGEQQ KALSSNAFRR LCRTDYLNYL RVREWQDIYT QLRQVVKELG IPVNSEPAEY
REIHIALLTG LLSHIGMKDA DKQEYTGARN ARFSIFPGSG LFKKPPKWVM VAELVETSRL
WGRIAARIDP EWVEPVAQHL IKRTYSEPHW ERAQGAVMAT EKVTVYGLPI VAARKVNYSQ
IDPALCRELF IRHALVEGDW QTRHAFFREN LKLRAEVEEL EHKSRRRDIL VDDETLFEFY
DQRISHDVIS ARHFDSWWKK VSRETPDLLN FEKSMLIKEG AEKISKLDYP NFWHQGNLKL
RLSYQFEPGA DADGVTVHIP LPLLNQVEES GFEWQIPGLR RELVIALIKS LPKPVRRNFV
PAPNYAEAFL GRVTPLELPL LDSLERELRR MTGVTVDRED WHWDQVPDHL KITFRVVDDK
NKKLKEGRSL QDLKDALKGK VQETLSAVAD DGIEQSGLHI WSFGQLPESY EQKRGNYKVK
AWPALVDERD SVAIKLFDNP LEQKQAMWNG LRRLLLLNIP SPIKYLHEKL PNKAKLGLYF
NPYGKVLELI DDCISCGVDK LIDANGGPVW TEEGFAALHE KVRAELNDTV VDIAKQVEQI
LTAVFNINKR LKGRVDMTMA LGLSDIKAQM GGLVYRGFVT GNGFKRLGDT LRYLQAIEKR
LEKLAVDPHR DRAQMLKVEN VQQAWQQWIN KLPPARREDE DVKEIRWMIE ELRVSYFAQQ
LGTPYPISDK RILQAMEQIS G
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