Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01248 |
Symbol | sohB |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1315702 |
End bp | 1316751 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | predicted inner membrane peptidase |
Protein accession | ACT43137 |
Protein GI | 253977467 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.57179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAATTGT TGTCTGAATA TGGTTTGTTT TTGGCGAAAA TCGTTACCGT TGTGCTAGCG ATTGCGGCGA TTGCCGCCAT TATTGTCAAT GTTGCTCAAC GTAATAAACG CCAGCGTGGC GAGTTACGGG TCAACAATCT CAGCGAACAG TATAAGGAGA TGAAAGAAGA ACTGGCCGCG GCGCTGATGG ACTCACATCA GCAAAAACAG TGGCACAAAG CGCAGAAGAA AAAGCATAAG CAAGAAGCGA AAGCAGCAAA AGCGAAAGCC AAACTGGGCG AGGTGGCAAC TGACAGTAAA CCCCGCGTCT GGGTGCTGGA TTTTAAAGGC AGCATGGACG CCCATGAAGT GAACTCGCTA CGTGAAGAGA TAACGGCTGT ACTCGCAGCA TTCAAACCGC AGGATCAGGT TGTGCTCCGT CTGGAAAGCC CTGGTGGCAT GGTGCATGGT TACGGGCTGG CGGCTTCGCA ACTGCAGCGT CTGCGCGATA AAAACATTCC TTTAACTGTT ACGGTAGACA AAGTCGCTGC CAGCGGCGGT TACATGATGG CCTGTGTGGC GGACAAAATT GTTTCCGCAC CGTTTGCTAT TGTGGGTTCC ATTGGCGTGG TGGCGCAAAT GCCCAACTTT AACCGCTTCC TGAAAAGCAA AGATATTGAT ATCGAACTGC ACACTGCCGG GCAGTATAAG CGCACGCTGA CGTTGCTGGG TGAAAATACC GAAGAAGGGC GGGAGAAATT CCGCGAAGAG TTGAACGAAA CGCATCAGTT GTTTAAAGAT TTTGTGAAGC GTATGCGTCC TTCTCTGGAT ATTGAACAGG TGGCAACGGG TGAACACTGG TACGGACAAC AGGCGGTAGA GAAAGGCCTG GTTGATGAAA TCAACACCAG TGATGAAGTT ATTCTTAGCC TGATGGAAGG CCGTGAAGTG GTCAATGTAC GCTATATGCA GCGTAAACGA CTCATTGACC GATTCACCGG CAGCGCGGCA GAGAGCGCCG ATCGATTGTT GCTACGCTGG TGGCAGCGGG GTCAAAAGCC ATTGATGTAA
|
Protein sequence | MELLSEYGLF LAKIVTVVLA IAAIAAIIVN VAQRNKRQRG ELRVNNLSEQ YKEMKEELAA ALMDSHQQKQ WHKAQKKKHK QEAKAAKAKA KLGEVATDSK PRVWVLDFKG SMDAHEVNSL REEITAVLAA FKPQDQVVLR LESPGGMVHG YGLAASQLQR LRDKNIPLTV TVDKVAASGG YMMACVADKI VSAPFAIVGS IGVVAQMPNF NRFLKSKDID IELHTAGQYK RTLTLLGENT EEGREKFREE LNETHQLFKD FVKRMRPSLD IEQVATGEHW YGQQAVEKGL VDEINTSDEV ILSLMEGREV VNVRYMQRKR LIDRFTGSAA ESADRLLLRW WQRGQKPLM
|
| |