Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01219 |
Symbol | oppC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1289426 |
End bp | 1290334 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | oligopeptide transporter subunit |
Protein accession | ACT43109 |
Protein GI | 253977439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.224373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTAA GTAAGAAAAA CAGCGAGACG CTGGAAAATT TCAGTGAAAA GCTGGAGGTC GAAGGGCGCA GCTTGTGGCA GGACGCACGT CGACGTTTTA TGCATAACCG TGCGGCGGTT GCCAGTCTGA TAGTGCTGGT GCTGATCGCG TTATTTGTAA TCCTGGCACC GATGCTTTCC CAGTTTGCCT ATGACGATAC TGACTGGGCG ATGATGTCCA GCGCCCCGGA TATGGAGTCC GGTCACTACT TTGGTACTGA CTCATCCGGT CGCGACCTGC TTGTGCGCGT TGCGATTGGC GGGCGTATCT CACTCATGGT CGGTGTTGCT GCGGCACTGG TGGCTGTGGT CGTCGGGACA CTTTATGGTT CGCTTTCCGG TTATCTGGGC GGTAAAGTGG ATTCGGTAAT GATGCGTCTG CTGGAAATCC TCAACTCCTT CCCATTCATG TTCTTCGTCA TTTTGCTGGT GACCTTTTTC GGTCAAAACA TCCTGCTGAT TTTCGTGGCG ATAGGCATGG TTTCCTGGCT GGATATGGCT CGTATTGTGC GTGGGCAAAC CCTGAGTCTG AAGCGCAAAG AGTTTATTGA GGCGGCACAA GTTGGCGGTG TATCGACATC GGGCATTGTT ATTCGCCACA TTGTGCCGAA TGTACTCGGT GTGGTGGTGG TCTACGCATC ACTTCTGGTG CCCAGCATGA TCCTCTTTGA ATCTTTCCTT AGCTTCCTGG GGTTGGGTAC GCAAGAGCCG TTAAGCAGCT GGGGTGCATT GCTGAGTGAT GGCGCGAACT CGATGGAAGT CTCTCCATGG TTATTGTTGT TCCCAGCGGG ATTCCTCGTG GTGACGCTGT TTTGTTTCAA CTTTATCGGC GATGGCTTGC GTGATGCCCT CGACCCGAAA GATCGTTAA
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Protein sequence | MMLSKKNSET LENFSEKLEV EGRSLWQDAR RRFMHNRAAV ASLIVLVLIA LFVILAPMLS QFAYDDTDWA MMSSAPDMES GHYFGTDSSG RDLLVRVAIG GRISLMVGVA AALVAVVVGT LYGSLSGYLG GKVDSVMMRL LEILNSFPFM FFVILLVTFF GQNILLIFVA IGMVSWLDMA RIVRGQTLSL KRKEFIEAAQ VGGVSTSGIV IRHIVPNVLG VVVVYASLLV PSMILFESFL SFLGLGTQEP LSSWGALLSD GANSMEVSPW LLLFPAGFLV VTLFCFNFIG DGLRDALDPK DR
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