Gene ECD_01186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01186 
SymbolprfA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1253160 
End bp1254242 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID 
Productpeptide chain release factor 1 
Protein accessionACT43078 
Protein GI253977408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.304726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTT CTATCGTTGC CAAACTGGAA GCCCTGCATG AACGCCATGA AGAAGTTCAG 
GCGTTGCTGG GTGACGCGCA AACTATCGCC GACCAGGAAC GTTTTCGCGC ATTATCACGC
GAATATGCGC AGTTAAGTGA TGTTTCGCGC TGTTTTACCG ACTGGCAACA GGTTCAGGAA
GATATCGAAA CCGCACAGAT GATGCTCGAT GATCCTGAAA TGCGTGAGAT GGCGCAGGAT
GAACTGCGCG AAGCTAAAGA AAAAAGCGAG CAACTGGAAC AGCAATTACA GGTTCTGTTA
CTACCAAAAG ATCCTGATGA CGAACGTAAC GCCTTCCTCG AAGTCCGTGC CGGAACCGGC
GGCGACGAAG CGGCGCTGTT CGCAGGCGAT CTGTTCCGTA TGTACAGCCG TTATGCCGAA
GCCCGCCGCT GGCGGGTAGA AATCATGAGC GCCAGCGAGG GTGAACATGG TGGTTATAAA
GAGATCATCG CCAAAATTAG CGGTGATGGT GTGTATGGTC GTCTGAAATT TGAATCTGGC
GGTCATCGCG TGCAGCGTGT TCCTGCTACG GAATCGCAGG GGCGTATTCA TACTTCTGCT
TGTACCGTTG CGGTAATGCC AGAGCTGCCT GACGCAGAAC TGCCGGACAT CAACCCAGCA
GATTTACGCA TTGATACTTT CCGCTCGTCA GGGGCGGGTG GTCAGCACGT TAACACCACC
GATTCGGCAA TTCGTATTAC TCACTTGCCG ACCGGGATTG TTGTTGAATG TCAGGACGAA
CGTTCACAAC ATAAAAACAA AGCTAAAGCA CTTTCTGTAC TCGGTGCTCG CATCCACGCT
GCTGAAATGG CAAAACGTCA ACAGGCCGAA GCGTCTACCC GTCGTAACCT GCTGGGGAGT
GGCGATCGCA GCGACCGTAA CCGTACTTAC AACTTCCCAC AGGGGCGCGT TACCGATCAC
CGCATCAACC TGACGCTCTA CCGCCTGGAT GAAGTGATGG AAGGTAAGCT GGATATGCTG
ATTGAACCGA TTATCCAGGA ACATCAGGCC GACCAACTGG CGGCGTTGTC CGAGCAGGAA
TAA
 
Protein sequence
MKPSIVAKLE ALHERHEEVQ ALLGDAQTIA DQERFRALSR EYAQLSDVSR CFTDWQQVQE 
DIETAQMMLD DPEMREMAQD ELREAKEKSE QLEQQLQVLL LPKDPDDERN AFLEVRAGTG
GDEAALFAGD LFRMYSRYAE ARRWRVEIMS ASEGEHGGYK EIIAKISGDG VYGRLKFESG
GHRVQRVPAT ESQGRIHTSA CTVAVMPELP DAELPDINPA DLRIDTFRSS GAGGQHVNTT
DSAIRITHLP TGIVVECQDE RSQHKNKAKA LSVLGARIHA AEMAKRQQAE ASTRRNLLGS
GDRSDRNRTY NFPQGRVTDH RINLTLYRLD EVMEGKLDML IEPIIQEHQA DQLAALSEQE