Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01133 |
Symbol | ymfC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 1197665 |
End bp | 1198318 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | 23S rRNA pseudouridine synthase |
Protein accession | ACT43027 |
Protein GI | 253977357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCAAT TCATAATCTC TGAAAATACC ATGCAAAAAA CTTCTTTTAG AAATCACCAG GTTAAGCGAT TCAGCTCGCA ACGTTCTACC AGGCGTAAAC CTGAAAACCA GCCCACGCGT GTGATCCTCT TCAATAAACC CTACGATGTT CTTCCGCAGT TCACCGATGA AGCCGGACGC AAAACATTAA AAGAATTCAT CCCGGTTCAG GGCGTTTATG CAGCAGGTCG TCTTGACCGC GATAGCGAAG GGTTACTGGT GCTGACCAAT AACGGCGCGT TGCAGGCGCG TTTAACCCAG CCGGGTAAAC GCACCGGAAA AATCTATTAT GTGCAGGTGG AAGGTTTTCC CACGCAAGAC GCAATTGAAG CCTTGCGCAA TGGCGTAACC TTAAATGATG GCCCTACCCT GCCCGCAGGC GCGGAGCTGG TTGACGAACC CGCGTGGTTA TGGCCGCGGA ATCCACCAAT TCGTGAACGC AAAAGTATTC CCACCAGCTG GCTGAAGATC ACCTTATATG AAGGACGTAA TCGCCAGGTG CGCCGCATGA CCGCCCATGT TGGCTTCCCC ACGCTGCGAC TGATTCGTTA TGCGATGGGT GATTACACTT TGGATAACCT TGCCAATGGC GAATGGCGAG AAGCAACAGA ATAA
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Protein sequence | MRQFIISENT MQKTSFRNHQ VKRFSSQRST RRKPENQPTR VILFNKPYDV LPQFTDEAGR KTLKEFIPVQ GVYAAGRLDR DSEGLLVLTN NGALQARLTQ PGKRTGKIYY VQVEGFPTQD AIEALRNGVT LNDGPTLPAG AELVDEPAWL WPRNPPIRER KSIPTSWLKI TLYEGRNRQV RRMTAHVGFP TLRLIRYAMG DYTLDNLANG EWREATE
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