Gene ECD_01133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01133 
SymbolymfC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1197665 
End bp1198318 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content51% 
IMG OID 
Product23S rRNA pseudouridine synthase 
Protein accessionACT43027 
Protein GI253977357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAAT TCATAATCTC TGAAAATACC ATGCAAAAAA CTTCTTTTAG AAATCACCAG 
GTTAAGCGAT TCAGCTCGCA ACGTTCTACC AGGCGTAAAC CTGAAAACCA GCCCACGCGT
GTGATCCTCT TCAATAAACC CTACGATGTT CTTCCGCAGT TCACCGATGA AGCCGGACGC
AAAACATTAA AAGAATTCAT CCCGGTTCAG GGCGTTTATG CAGCAGGTCG TCTTGACCGC
GATAGCGAAG GGTTACTGGT GCTGACCAAT AACGGCGCGT TGCAGGCGCG TTTAACCCAG
CCGGGTAAAC GCACCGGAAA AATCTATTAT GTGCAGGTGG AAGGTTTTCC CACGCAAGAC
GCAATTGAAG CCTTGCGCAA TGGCGTAACC TTAAATGATG GCCCTACCCT GCCCGCAGGC
GCGGAGCTGG TTGACGAACC CGCGTGGTTA TGGCCGCGGA ATCCACCAAT TCGTGAACGC
AAAAGTATTC CCACCAGCTG GCTGAAGATC ACCTTATATG AAGGACGTAA TCGCCAGGTG
CGCCGCATGA CCGCCCATGT TGGCTTCCCC ACGCTGCGAC TGATTCGTTA TGCGATGGGT
GATTACACTT TGGATAACCT TGCCAATGGC GAATGGCGAG AAGCAACAGA ATAA
 
Protein sequence
MRQFIISENT MQKTSFRNHQ VKRFSSQRST RRKPENQPTR VILFNKPYDV LPQFTDEAGR 
KTLKEFIPVQ GVYAAGRLDR DSEGLLVLTN NGALQARLTQ PGKRTGKIYY VQVEGFPTQD
AIEALRNGVT LNDGPTLPAG AELVDEPAWL WPRNPPIRER KSIPTSWLKI TLYEGRNRQV
RRMTAHVGFP TLRLIRYAMG DYTLDNLANG EWREATE