Gene ECD_01122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01122 
SymbolpotC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1186194 
End bp1186988 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID 
Productspermidine/putrescine ABC transporter membrane protein 
Protein accessionACT43016 
Protein GI253977346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGTC GACTGCTTCG CGGCGGTTTT ATGACCGCTA TCTACGCGTA CCTGTATATC 
CCAATCATTA TTTTGATTGT GAACTCCTTT AACAGCTCGC GCTTTGGCAT CAACTGGCAG
GGTTTTACCA CCAAATGGTA TAGCCTGCTG ATGAACAACG ACAGCCTGTT ACAGGCAGCG
CAGCATTCAC TAACAATGGC GGTGTTTTCG GCGACGTTTG CTACGCTTAT CGGTTCACTG
ACGGCAGTTG CGCTGTACCG TTATCGCTTT CGCGGTAAGC CGTTCGTTAG CGGAATGCTG
TTTGTGGTAA TGATGTCACC AGATATCGTG ATGGCAATTT CGCTGCTGGT GCTGTTTATG
CTGCTGGGTA TTCAGCTTGG CTTCTGGTCG CTGCTGTTCT CGCATATCAC CTTCTGCCTG
CCATTTGTGG TGGTGACGGT GTATTCGCGC CTGAAAGGTT TTGACGTGCG GATGCTGGAA
GCGGCGAAAG ATCTCGGTGC CAGCGAATTT ACCATTCTGC GAAAAATCAT TCTGCCACTG
GCAATGCCAG CGGTGGCGGC GGGCTGGGTG TTAAGCTTTA CCCTGTCGAT GGACGATGTG
GTAGTTTCTT CGTTCGTCAC CGGACCAAGT TATGAAATTC TGCCGTTAAA AATTTATTCG
ATGGTCAAAG TCGGCGTATC GCCGGAAGTT AACGCGCTGG CAACCATATT ACTGGTGCTG
TCGCTGGTGA TGGTTATTGC CAGCCAGCTT ATTGCTCGTG ATAAAACGAA AGGTAACACA
GGGGACGTTA AATGA
 
Protein sequence
MIGRLLRGGF MTAIYAYLYI PIIILIVNSF NSSRFGINWQ GFTTKWYSLL MNNDSLLQAA 
QHSLTMAVFS ATFATLIGSL TAVALYRYRF RGKPFVSGML FVVMMSPDIV MAISLLVLFM
LLGIQLGFWS LLFSHITFCL PFVVVTVYSR LKGFDVRMLE AAKDLGASEF TILRKIILPL
AMPAVAAGWV LSFTLSMDDV VVSSFVTGPS YEILPLKIYS MVKVGVSPEV NALATILLVL
SLVMVIASQL IARDKTKGNT GDVK