Gene ECD_01118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01118 
SymbolcobB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1182890 
End bp1183729 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content52% 
IMG OID 
ProductNAD-dependent deacetylase 
Protein accessionACT43012 
Protein GI253977342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCGC GTCGGGGTCA TCGGTTAAGT CGTTTTCGTA AAAATAAACG CCGCCTGCGC 
GAGCGTTTGC GTCAGCGTAT TTTTTTCAGA GATAAAGTGG TGCCGGAAGC AATGGAAAAA
CCAAGAGTAC TCGTACTGAC AGGGGCAGGA ATTTCTGCGG AATCAGGTAT TCGTACCTTT
CGCGCCGCAG ATGGCCTGTG GGAAGAACAT CGGGTTGAAG ATGTGGCAAC GCCGGAAGGT
TTCGATCGCG ATCCTGAACT GGTGCAAGCG TTTTATAACG CCCGTCGTCG ACAGCTGCAG
CAGCCAGAAA TTCAGCCTAA CGCCGCGCAT CTTGCGCTGG CTAAACTGCA AGACGCCCTC
GGCGATCGCT TTTTGCTGGT GACGCAGAAT ATCGACAACC TGCATGAACG CGCAGGTAAT
ACCAATGTGA TTCATATGCA TGGGGAACTG CTGAAAGTGC GTTGTTCACA AAGTGGTCAG
GTTCTCGACT GGACAGGAGA CGTTACCCCA GAAGATAAAT GCCATTGTTG CCAGTTTCCG
GCACCCTTGC GCCCGCATGT AGTGTGGTTT GGCGAAATGC CACTCGGCAT GGATGAAATT
TATATGGCGT TGTCGATGGC CGATATTTTC ATTGCCATTG GCACATCCGG GCATGTTTAT
CCGGCGGCTG GGTTTGTTCA CGAAGCGAAA CTGCATGGCG CGCACACCGT GGAACTGAAT
CTTGAACCGA GTCAGGTTGG TAATGAATTT GCCGAGAAAT ATTACGGCCC GGCAAGCCAG
GTGGTGCCTG AGTTTGTTGA AAAGTTGCTG AAGGGATTAA AAGCGGGAAG CATTGCCTGA
 
Protein sequence
MLSRRGHRLS RFRKNKRRLR ERLRQRIFFR DKVVPEAMEK PRVLVLTGAG ISAESGIRTF 
RAADGLWEEH RVEDVATPEG FDRDPELVQA FYNARRRQLQ QPEIQPNAAH LALAKLQDAL
GDRFLLVTQN IDNLHERAGN TNVIHMHGEL LKVRCSQSGQ VLDWTGDVTP EDKCHCCQFP
APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN
LEPSQVGNEF AEKYYGPASQ VVPEFVEKLL KGLKAGSIA