Gene ECD_01110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01110 
Symbolmfd 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1173111 
End bp1176557 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscription-repair coupling factor 
Protein accessionACT43005 
Protein GI253977335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.358379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAC AATATCGTTA TACGCTGCCC GTCAAAGCGG GTGAGCAGCG TCTGCTGGGC 
GAGTTAACCG GCGCTGCCTG TGCGACGCTG GTAGCGGAAA TTGCCGAACG TCACGCCGGT
CCGGTGGTAC TCATTGCACC AGATATGCAA AATGCTCTGC GTTTGCATGA TGAAATCAGC
CAGTTTACCG ATCAAATGGT GATGAATCTG GCGGACTGGG AAACTCTTCC CTACGACAGT
TTTTCGCCTC ATCAGGACAT TATCTCCTCG CGCCTTTCCA CCCTTTACCA GCTACCGACG
ATGCAGCGTG GCGTACTGAT TGTTCCGGTG AATACGCTTA TGCAGCGCGT TTGCCCACAC
AGTTTTCTCC ACGGTCATGC GCTGGTGATG AAAAAAGGTC AGCGCCTGTC ACGAGATGCA
TTACGAACCC AACTGGACAG CGCAGGTTAT CGCCATGTTG ACCAGGTGAT GGAGCACGGC
GAATACGCCA CGCGCGGCGC GTTGCTAGAT CTCTTCCCGA TGGGGAGTGA GCTGCCTTAT
CGTCTTGATT TCTTTGATGA TGAAATCGAC AGCCTGCGGG TGTTTGACGT CGACAGCCAG
CGCACGCTGG AGGAAGTAGA AGCGATCAAC CTGCTGCCCG CGCACGAATT CCCGACCGAT
AAAGCGGCAA TTGAACTGTT CCGCAGCCAG TGGCGCGATA CCTTCGAAGT GAAGCGCGAT
CCAGAACATA TTTACCAGCA AGTGAGTAAA GGCACATTGC CTGCCGGGAT CGAGTACTGG
CAGCCACTGT TCTTCAGCGA GCCGCTGCCG CCGCTGTTCA GTTATTTCCC TGCCAATACC
TTGCTGGTGA ATACTGGCGA TCTGGAAAAC AGTGCCGAAC GTTTCCAGGC TGACACGCTG
GCGCGTTTTG AGAATCGCGG CGTCGACCCA ATGCGCCCAC TTTTGCCACC ACAATCGCTC
TGGCTGCGGG TGGACGAGCT CTTCTCAGAG CTGAAAAACT GGCCCCGGGT GCAGCTAAAA
ACTGAACATT TACCGACAAA AGCAGCGAAT GCCAATTTAG GCTTCGAGAA GCTGCCAGAC
CTGGCCGTTC AGGCACAACA AAAAGCGCCG CTGGATGCGC TGCGTAAGTT CCTCGAGTCT
TTCGACGGTC CGGTGGTGTT CTCGGTAGAA AGTGAAGGTC GCCGTGAAGC GCTGGGTGAA
CTGCTCGCAC GAATTAAAAT TGCTCCGCAA CGCATTATGC GTCTTGATGA AGCCAGCGAC
CGTGGGCGTT ATCTGATGAT TGGCGCTGCC GAACATGGTT TTGTCGATAA GGTGCGTAAC
CTAGCGCTGA TTTGCGAAAG CGATCTGCTC GGTGAACGTG TTGCCCGCCG TCGTCAGGAT
TCTCGCCGCA CCATCAACCC CGATACACTG ATCCGTAACC TTGCGGAGCT GCATATTGGC
CAGCCGGTGG TCCATCTGGA GCACGGCGTC GGTCGCTATG CCGGAATGAC CACGCTGGAA
GCGGGCGGCA TTACCGGCGA GTACCTGATG CTCACCTATG CCAACGACGC CAAACTGTAT
GTTCCGGTGT CGTCACTGCA TCTGATTAGC CGTTACGCAG GTGGCGCGGA AGAAAACGCC
CCGCTGCATA AACTTGGCGG TGATGCGTGG TCACGCGCGC GGCAGAAAGC GGCGGAAAAA
GTGCGTGATG TGGCGGCGGA ATTGCTGGAT ATCTACGCGC AACGCGCCGC CAAAGAGGGC
TTCGCGTTTA AACACGATCG TGAGCAGTAT CAGTTGTTCT GCGACAGCTT CCCGTTTGAA
ACCACGCCGG ATCAGGCTCA AGCCATTAAT GCGGTGCTTA GCGACATGTG TCAGCCACTG
GCAATGGATC GTCTGGTGTG CGGCGATGTT GGCTTTGGTA AAACAGAAGT GGCAATGCGC
GCCGCTTTCC TGGCAGTAGA TAACCACAAG CAGGTAGCGG TGCTGGTGCC TACCACCCTT
CTCGCGCAGC AGCATTACGA CAACTTCCGC GACCGTTTCG CCAACTGGCC GGTCCGTATC
GAAATGATCT CCCGTTTCCG CAGCGCCAAA GAGCAGACGC AAATCCTTGC GGAAGTGGCG
GAAGGGAAAA TCGATATTCT GATCGGTACG CACAAACTGC TGCAAAGTGA CGTCAAGTTT
AAAGATTTAG GCCTGCTGAT TGTCGATGAA GAACACCGCT TCGGGGTGCG TCATAAAGAG
CGCATTAAAG CGATGCGCGC GAACGTGGAT ATTCTGACGC TTACTGCAAC GCCGATCCCA
CGTACGCTGA ATATGGCAAT GAGCGGAATG CGTGACCTGT CGATTATCGC CACGCCGCCC
GCCCGTCGTC TGGCAGTTAA AACCTTTGTC CGTGAGTATG ACAGCCTGGT GGTCCGGGAG
GCGATCCTGC GTGAAATTTT GCGCGGAGGA CAGGTTTATT ATCTCTACAA TGATGTGGAA
AACATTCAGA AAGCCGCCGA ACGGCTGGCA GAACTGGTGC CAGAAGCGCG GATCGCCATC
GGTCACGGGC AGATGCGCGA GCGCGAACTG GAACGGGTGA TGAATGATTT CCATCATCAA
CGTTTCAACG TGCTGGTTTG TACCACCATT ATCGAAACCG GGATCGACAT CCCGACAGCC
AACACCATTA TCATTGAACG GGCGGATCAC TTCGGTCTGG CGCAGCTGCA CCAGTTACGC
GGTCGCGTCG GACGTTCGCA TCATCAGGCA TATGCATGGT TGCTGACACC GCATCCAAAA
GCGATGACTA CCGATGCACA AAAACGTCTT GAAGCGATTG CCTCGCTGGA AGATCTCGGG
GCAGGTTTTG CGCTGGCAAC GCACGATCTG GAGATTCGCG GCGCGGGTGA ACTGCTTGGC
GAAGAACAAA GCGGCTCAAT GGAAACCATC GGTTTCTCGC TGTATATGGA GTTGCTGGAA
AACGCCGTCG ATGCACTGAA AGCCGGACGC GAGCCGTCGC TGGAAGATCT CACCAGCCAT
CAAACAGAAG TCGAGCTGCG GATGCCGTCG CTATTGCCAG ATGATTTCAT CCCTGACGTG
AACACGCGTC TGTCGTTCTA CAAACGTATT GCCAGCGCCA AAACGGAAAA CGAACTGGAA
GAGATCAAAG TCGAGCTTAT CGATCGCTTC GGCCTGCTGC CGGATCCGGC GCGTACCCTG
CTGGATATTG CCCGTCTGCG CCAGCAAGCG CAGAAACTGG GGATCAGGAA GCTGGAAGGT
AATGAGAAAG GCGGGGTGAT CGAATTTGCC GAGAAGAATC ACGTTAATCC GGCCTGGTTG
ATTGGTTTGC TGCAAAAACA GCCGCAGCAT TACCGCCTTG ATGGTCCGAC GCGCCTGAAA
TTTATTCAGG ATTTGAGTGA GCGGAAAACG CGTATCGAAT GGGTACGCCA GTTTATGCGT
GAACTGGAAG AGAACGCGAT CGCTTAA
 
Protein sequence
MPEQYRYTLP VKAGEQRLLG ELTGAACATL VAEIAERHAG PVVLIAPDMQ NALRLHDEIS 
QFTDQMVMNL ADWETLPYDS FSPHQDIISS RLSTLYQLPT MQRGVLIVPV NTLMQRVCPH
SFLHGHALVM KKGQRLSRDA LRTQLDSAGY RHVDQVMEHG EYATRGALLD LFPMGSELPY
RLDFFDDEID SLRVFDVDSQ RTLEEVEAIN LLPAHEFPTD KAAIELFRSQ WRDTFEVKRD
PEHIYQQVSK GTLPAGIEYW QPLFFSEPLP PLFSYFPANT LLVNTGDLEN SAERFQADTL
ARFENRGVDP MRPLLPPQSL WLRVDELFSE LKNWPRVQLK TEHLPTKAAN ANLGFEKLPD
LAVQAQQKAP LDALRKFLES FDGPVVFSVE SEGRREALGE LLARIKIAPQ RIMRLDEASD
RGRYLMIGAA EHGFVDKVRN LALICESDLL GERVARRRQD SRRTINPDTL IRNLAELHIG
QPVVHLEHGV GRYAGMTTLE AGGITGEYLM LTYANDAKLY VPVSSLHLIS RYAGGAEENA
PLHKLGGDAW SRARQKAAEK VRDVAAELLD IYAQRAAKEG FAFKHDREQY QLFCDSFPFE
TTPDQAQAIN AVLSDMCQPL AMDRLVCGDV GFGKTEVAMR AAFLAVDNHK QVAVLVPTTL
LAQQHYDNFR DRFANWPVRI EMISRFRSAK EQTQILAEVA EGKIDILIGT HKLLQSDVKF
KDLGLLIVDE EHRFGVRHKE RIKAMRANVD ILTLTATPIP RTLNMAMSGM RDLSIIATPP
ARRLAVKTFV REYDSLVVRE AILREILRGG QVYYLYNDVE NIQKAAERLA ELVPEARIAI
GHGQMREREL ERVMNDFHHQ RFNVLVCTTI IETGIDIPTA NTIIIERADH FGLAQLHQLR
GRVGRSHHQA YAWLLTPHPK AMTTDAQKRL EAIASLEDLG AGFALATHDL EIRGAGELLG
EEQSGSMETI GFSLYMELLE NAVDALKAGR EPSLEDLTSH QTEVELRMPS LLPDDFIPDV
NTRLSFYKRI ASAKTENELE EIKVELIDRF GLLPDPARTL LDIARLRQQA QKLGIRKLEG
NEKGGVIEFA EKNHVNPAWL IGLLQKQPQH YRLDGPTRLK FIQDLSERKT RIEWVRQFMR
ELEENAIA