Gene ECD_01109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01109 
SymbolycfS 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1172005 
End bp1172967 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionACT43004 
Protein GI253977334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.978931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGATCA AAACGCGTTT TTCTCGCTGG CTAACTTTTT TTACGTTCGC CGCTGCCGTG 
GCGCTGGCGC TACCGGCAAA AGCCAACACC TGGCCGCTGC CGCCAGCGGG CAGTCGTCTG
GTTGGCGAAA ACAAATTTCA TGTGGTGGAA AATGACGGTG GTTCTCTGGA AGCCATCGCC
AAAAAATATA ACGTCGGCTT TCTCGCTCTG TTACAGGCTA ACCTCGGCGT TGATCCTTAC
GTACCGCGCG CGGGCAGCGT GTTAACGATC CCGTTGCAAA CCCTACTTCC AGACGCGCCG
CGCGAAGGCA TTGTGATCAA CATTGCGGAG CTGCGTCTCT ATTACTACCC GCCGGGTAAA
AATTCGGTAA CCGTGTATCC AATAGGTATT GGTCAGTTAG GTGGTGACAC GCTGACACCG
ACAATGGTGA CCACCGTTTC AGACAAACGT GCAAACCCAA CCTGGACGCC AACGGCAAAC
ATCCGCGCCC GTTATAAAGC ACAGGGAATT GAGTTGCCTG CGGTAGTGCC GGCTGGACCG
GATAACCCAA TGGGCCATCA TGCGATTCGT CTGGCGGCCT ATGGCGGCGT TTATTTGCTT
CATGGTACGA ACGCCGATTT TGGCATTGGC ATGCGGGTAA GTTCTGGCTG TATTCGTCTG
CGGGATGACG ATATCAAAAC ACTCTTTAGC CAGGTCACCC CAGGCACCAA AGTGAATATC
ATCAACACTC CGATAAAAGT CTCTGCCGAA CCAAACGGTG CGCGTCTGGT TGAAGTACAT
CAGCCGCTGT CAGAGAAGAT TGATGACGAT CCGCAGCTGC TGCCAATTAC GCTGAATAGC
GCAATGCAAT CATTTAAAGA TGCAGCACAA ACTGACGCTG AAGTGATGCA ACATGTGATG
GATGTCCGTT CCGGGATGCC GGTGGATGTC CGCCGTCATC AAGTGAGCCC ACAAACTCTG
TAA
 
Protein sequence
MMIKTRFSRW LTFFTFAAAV ALALPAKANT WPLPPAGSRL VGENKFHVVE NDGGSLEAIA 
KKYNVGFLAL LQANLGVDPY VPRAGSVLTI PLQTLLPDAP REGIVINIAE LRLYYYPPGK
NSVTVYPIGI GQLGGDTLTP TMVTTVSDKR ANPTWTPTAN IRARYKAQGI ELPAVVPAGP
DNPMGHHAIR LAAYGGVYLL HGTNADFGIG MRVSSGCIRL RDDDIKTLFS QVTPGTKVNI
INTPIKVSAE PNGARLVEVH QPLSEKIDDD PQLLPITLNS AMQSFKDAAQ TDAEVMQHVM
DVRSGMPVDV RRHQVSPQTL