Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01082 |
Symbol | rluC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1147507 |
End bp | 1148466 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | 23S rRNA pseudouridylate synthase |
Protein accession | ACT42977 |
Protein GI | 253977307 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000778536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG AGACTCCATC CGTAAAAATT GTTGCTATCA CCGCTGACGA AGCGGGGCAA CGTATCGATA ACTTTTTGCG TACCCAATTG AAAGGCGTAC CAAAAAGTAT GATTTACCGT ATTTTGCGTA AAGGCGAAGT GCGGGTGAAC AAAAAACGTA TTAAGCCTGA ATATAAACTC GAAGCGGGTG ATGAGGTGCG TATTCCACCG GTTCGCGTTG CTGAGCGGGA AGAAGAGGCG GTTTCGCCAC ATCTGCAAAA GGTGGCGGCG CTGGCGGACG TCATCTTATA TGAAGATGAT CACATCCTGG TGCTGAATAA ACCTTCCGGT ACGGCGGTAC ATGGCGGCAG TGGTTTAAGC TTCGGCGTTA TTGAAGGTTT GCGGGCGTTG CGCCCGGAAG CGCGGTTCCT TGAACTGGTT CATCGTCTTG ACCGGGACAC CTCAGGTGTT TTGCTGGTAG CGAAAAAACG CTCGGCGTTG CGTTCTCTGC ATGAGCAATT ACGTGAAAAA GGGATGCAAA AAGATTACCT GGCGCTGGTG CGCGGTCAGT GGCAGTCGCA TGTGAAGAGC GTTCAAGCAC CGTTACTGAA AAATATTCTG CAAAGCGGCG AACGTATCGT GCGTGTGAGT CAGGAAGGCA AACCGTCGGA AACACGCTTT AAAGTGGAAG AACGCTATGC ATTTGCCACC CTGGTGCGTT GTAGCCCGGT AACAGGGCGT ACTCACCAGA TCCGTGTGCA TACACAATAT GCGGGTCATC CGATTGCCTT TGACGATCGC TACGGTGACC GTGAATTTGA CAGGCAGCTC ACTGAAGCAG GCACGGGATT AAATCGCCTG TTCCTGCACG CTGCAGCGTT GAAGTTTACT CATCCGGGGA CCGGTGAGGT GATGCGTATC GAAGCTCCGA TGGATGAAGG TTTGAAGCGT TGTTTGCAAA AGCTGCGTAA CGCGCGCTAA
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Protein sequence | MKTETPSVKI VAITADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRIKPEYKL EAGDEVRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD HILVLNKPSG TAVHGGSGLS FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV RGQWQSHVKS VQAPLLKNIL QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR THQIRVHTQY AGHPIAFDDR YGDREFDRQL TEAGTGLNRL FLHAAALKFT HPGTGEVMRI EAPMDEGLKR CLQKLRNAR
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