Gene ECD_01017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01017 
SymbolputA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1079202 
End bp1083164 
Gene Length3963 bp 
Protein Length1320 aa 
Translation table11 
GC content56% 
IMG OID 
Productfused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionACT42912 
Protein GI253977242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT 
GCCGCGACAC GTATCGATCG CACGCCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT
CTCGAACAAC TGGAAAACAG CGATACTCTG CCGGAGCTAC CTGCGCTGCT TTCTGGCGCT
GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAACC ATTCCTCGAC
TTTGCCGAGC AAATTTTGCC CCAGTCGGTT TCCCGCGCCG CGATCACAGC GGCCTATCGC
CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAGCCAGTT
GCTGAACAGG CGCACAAACT GGCGTATCAA CTGGCCGATA AACTGCGTAA TCAAAAAAAC
GCCAGTGGTC GCGCAGGTAT GGTTCAGGGG TTATTGCAGG AGTTTTCGTT GTCATCGCAG
GAAGGCGTGG CGCTGATGTG TCTGGCGGAA GCGTTGTTGC GTATTCCCGA CAAAGCTACC
CGTGATGCGT TAATTCGCGA CAAAATCAGT AACGGTAACT GGCAGTCACA CATTGGTCGT
AGCCCGTCAC TGTTTGTTAA TGCCGCCACC TGGGGGCTGC TGTTTACTGG CAAACTGGTT
TCCACCCATA ACGAAGCCAG CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAAAGCGGT
GAACCGCTGA TCCGCAAAGG TGTGGATATG GCGATGCGCC TGATGGGCGA GCAGTTCGTC
ACTGGCGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC
CTTTACTCTT ACGATATGCT TGGCGAAGCT GCACTGACTG CCGCAGATGC ACAAGCGTAT
ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATTGGTAAAG CGTCCAATGG TCGTGGCATC
TATGAAGGTC CGGGCATTTC AATCAAGCTG TCGGCGCTGC ATCCGCGTTA CAGCCGCGCC
CAGTATGACC GGGTAATGGA AGAGCTTTAC CCACGTCTGA AATCACTCAC CCTGCTGGCG
CGTCAGTACG ATATTGGTAT CAACATTGAC GCCGAAGAGG CCGATCGTCT GGAGATCTCC
CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCTGAGCTGG CAGGCTGGAA CGGTATCGGT
TTTGTTATTC AGGCTTATCA AAAACGCTGC CCACTGGTGA TTGATTACCT GATTGATCTC
GCCACCCGCA GCCGTCGCCG TCTGATGATT CGCCTGGTGA AAGGCGCGTA CTGGGATAGT
GAAATCAAGC GTGCGCAGAT GGACGGCCTT GAAGGCTATC CGGTTTATAC CCGCAAGGTG
TATACCGACG TTTCATATCT CGCCTGTGCG AAAAAGCTGC TGGCGGTGCC GAATCTAATC
TACCCGCAGT TCGCAACGCA CAACGCCCAT ACGCTGGCAG CGATTTATCA ACTGGCTGGT
CAAAACTACT ATCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCACTG
TATGAGCAGG TCACCGGGAA AGTTGCCGAC GGCAAACTTA ACCGTCCGTG TCGTATTTAT
GCCCCGGTTG GCACACATGA AACGCTGCTG GCGTATCTGG TGCGCCGCCT GCTGGAAAAC
GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGACACCT CTTTGCCACT GGATGAACTG
GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCGCAAC AGGAAGGGCA AACTGGATTA
CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA
GGGCTGGATC TCGCTAACGA ACACCGTCTG GCCTCGCTCT CCTCTGCCCT GCTCAATAGT
GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG
TCGCCCGTTA TTAACCCTGC AGAACCGAAA GATATTGTGG GCTATGTGCG TGAAGCCACG
CCGCGTGAAG TAGAACAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC
ACGCCTCCGG CTGAACGCGC GGCGATTTTG CACCGCGCTG CCGTGCTAAT GGAAAGCCAG
ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAAGCCGGAA AAACCTTCAG TAACGCCATT
GCCGAAGTGC GTGAAGCGGT CGATTTTCTC CACTACTACG CCGGACAGGT GCGGGATGAT
TTCGCTAACG AAACCCACCG TCCATTAGGG CCTGTGGTGT GTATCAGTCC GTGGAACTTC
CCGCTGGCTA TTTTCACCGG GCAGATCGCT GCCGCACTGG CGGCAGGTAA CAGCGTGCTG
GCAAAACCGG CAGAACAAAC GCCGCTGATT GCCGCGCAAG GGATCGCCAT TTTGCTTGAA
GCGGGTGTAC CGCCAGGCGT GGTGCAGTTG CTGCCAGGTC AGGGGGAAAC CGTGGGCGCG
CAACTGACGG GTGATGATCG CGTACGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT
ACGTTACTGC AGCGCAATAT CGCCAGCCGC CTGGACGCTC AGGGTCGCCC TATTCCGCTC
ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAA
GTAGTAATAG ATGTGCTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG
CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA
ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCGGTGATT
GATAGCGAAG CGAAAGTCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT
CCGGTGTTCC AGGCGGTGCG GGAAAACAGT GAAGATGCCC GTGAATGGCA AAGCGGCACC
TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT
GGTCCGGTGC TGCATGTGGT GCGTTACAAC CGTAACCAGC TACCAGAGCT GATCGAGCAG
ATTAACGCTT CCGGTTATGG TCTGACGCTT GGCGTCCATA CGCGTATTGA TGAAACTATC
GCCCAGGTCA CTGGCTCGGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC
GCAGTGGTTG GTGTGCAGCC GTTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA
GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCAGTA
ACGCTCGCGC GTCAGGATGC AGAGTATCCG GTCGATGCGC AGTTGAAAGC CGCATTGACT
CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT
ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCGGG GCCGACGGGT
GAACGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTGT TGTGTATTGC CGATGATGAG
CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT ACTGTGGCCG
GATGACGCGC TGCATCGTCA GTTAGTGAAG GCATTGCCAT CGGCAGTCAG CGAACGTATT
CAACTGGCGA AAGCGGAAAA TATAACCGCT CAACCGTTTG ATGCGGTGAT CTTCCACGGT
GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCCGTTGCTG CGCGGGATGG CGCAATTGTT
TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTTC TGGAACGGCT GTATATCGAG
CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGCTTAAT GACTATAGGT
TAA
 
Protein sequence
MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA 
ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV
AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT
RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEASLSR SLNRIIGKSG
EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF LYSYDMLGEA ALTAADAQAY
MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA
RQYDIGINID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL
ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI
YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY
APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL
PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM
SPVINPAEPK DIVGYVREAT PREVEQALES AVNNAPIWFA TPPAERAAIL HRAAVLMESQ
MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF
PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGQGETVGA
QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ
VVIDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI
DSEAKVNIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF
GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG
AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAEYP VDAQLKAALT
QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE
QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSAVSERI QLAKAENITA QPFDAVIFHG
DSDQLRALCE AVAARDGAIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG