| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01009 |
|---|
| Symbol | ycdG |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1072793 |
|---|
| End bp | 1074121 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted transporter |
|---|
| Protein accession | ACT42904 |
|---|
| Protein GI | 253977234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGT TCGGTCTTCC TCACTGGCAG TTAAAATCGA CCTCTACAGA GAGCGGCGTG
GTCGCGCCGG ATGAACGATT GCCGTTTGCT CAGACGGCAA TAATGGGCGT TCAACACGCG
GTGGCGATGT TTGGCGCGAC GGTGTTAATG CCGATTCTGA TGGGGCTGGA TCCCAATCTT
TCCATTTTAA TGTCGGGGAT CGGCACATTA CTGTTTTTCT TTATTACCGG CGGGCGCGTG
CCCAGTTATC TCGGATCCAG CGCGGCTTTT GTCGGCGTGG TGATCGCCGC AACGGGCTTT
AACGGTCAGG GCATTAACCC GAATATCAGC ATTGCGCTGG GCGGGATTAT CGCCTGTGGA
CTGGTTTATA CCGTCATTGG CCTGGTGGTG ATGAAAATCG GTACGCGCTG GATTGAACGG
CTAATGCCGC CGGTGGTGAC GGGTGCGGTG GTGATGGCGA TTGGCCTGAA CTTAGCGCCT
ATCGCAGTGA AAAGTGTATC GGCTTCGGCC TTTGATAGCT GGATGGCGGT AATGACGGTG
CTGTGTATTG GGCTGGTGGC GGTGTTTACC CGTGGCATGA TCCAGCGGTT ATTGATTCTC
GTAGGATTAA TTGTCGCCTG TCTGCTGTAT GGCGTGATGA CCAACGTTTT AGGGCTGGGA
AAAGCCGTCG ATTTTACTCT CGTCAGCCAT GCTGCCTGGT TCGGTCTGCC ACATTTTTCC
ACTCCTGCTT TTAATGGTCA GGCAATGATG CTGATTGCGC CCGTGGCGGT GATTCTGGTG
GCGGAAAACT TAGGTCATCT CAAGGCAGTC GCCGGGATGA CCGGACGCAA TATGGACCCG
TATATGGGGC GGGCATTCGT AGGCGATGGT CTGGCAACGA TGCTTTCCGG CTCTGTCGGC
GGTAGCGGCG TGACCACCTA TGCTGAAAAT ATCGGTGTGA TGGCCGTGAC CAAAGTCTAC
TCGACGCTGG TGTTTGTTGC TGCTGCCGTC ATCGCCATGC TGTTGGGCTT TTCGCCGAAA
TTTGGCGCGC TGATCCATAC CATTCCTGCA CCGGTGATTG GTGGTGCTTC AATTGTTGTG
TTCGGGCTGA TTGCCGTCGC AGGCGCAAGG ATCTGGGTAC AAAACCGTGT CGATTTAAGC
CAGAACGGTA ATTTGATTAT GGTCGCAGTA ACCTTAGTGC TGGGCGCGGG TGATTTTGCT
CTCACGCTGG GCGGTTTTAC GTTGGGAGGA ATCGGTACAG CCACCTTTGG CGCGATTTTA
CTCAATGCGT TATTAAGCAG AAGGTTGGTT GACGTTCCAC CGCCAGAAGT TGTTCATCAG
GAGCCATAA
|
|---|
| Protein sequence | MAMFGLPHWQ LKSTSTESGV VAPDERLPFA QTAIMGVQHA VAMFGATVLM PILMGLDPNL
SILMSGIGTL LFFFITGGRV PSYLGSSAAF VGVVIAATGF NGQGINPNIS IALGGIIACG
LVYTVIGLVV MKIGTRWIER LMPPVVTGAV VMAIGLNLAP IAVKSVSASA FDSWMAVMTV
LCIGLVAVFT RGMIQRLLIL VGLIVACLLY GVMTNVLGLG KAVDFTLVSH AAWFGLPHFS
TPAFNGQAMM LIAPVAVILV AENLGHLKAV AGMTGRNMDP YMGRAFVGDG LATMLSGSVG
GSGVTTYAEN IGVMAVTKVY STLVFVAAAV IAMLLGFSPK FGALIHTIPA PVIGGASIVV
FGLIAVAGAR IWVQNRVDLS QNGNLIMVAV TLVLGAGDFA LTLGGFTLGG IGTATFGAIL
LNALLSRRLV DVPPPEVVHQ EP
|
|---|
| |