Gene ECD_00948 details

Gene Information

• Locus tag: ECD_00948
• Symbol: ycbF
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 1009036
• End bp: 1009746
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 52%
• Product: predicted periplasmic pilini chaperone
• Protein accession: ACT42843
• Protein GI: 253977173

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00512688
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAATA CGTGGAACAG ATTGGCGCTC TTGATTTTCG CCGTTTTATC GCTGCTGGTG 
GCGGGTGAAT TGCAGGCAGG AGTGGTGGTC GGCGGAACGC GATTTATCTT TCCGGCAGAC 
AGAGAATCGA TATCTATTTT ACTGACTAAT ACCAGTCAGG AATCCTGGCT TATTAACAGT 
AAAATCAACC GCCCAACGCG TTGGGCCGGG GGGGAAGCGT CGACAGTGCC AGCACCATTA 
CTGGCCGCTC CGCCACTTAT TCTCCTGAAG CCCGGTACGA CAGGCACGTT GCGCTTGCTG 
AGAACGGAAA GCGACATCTT GCCTGTGGAT CGCGAAACGC TATTTGAGTT AAGCATTGCC 
AGCGTGCCAT CCGGCAAAGT TGAAAATCAG AGCGTAAAAG TGGCGATGCG CTCGGTATTT 
AAACTGTTCT GGCGACCCGA AGGTTTGCCG GGCGACCCGC TGGAAGCTTA TCAACAATTA 
CGCTGGACAC GGAATTCGCA GGGTGTACAA CTCACTAACC CAACGCCTTA TTACATTAAC 
CTGATTCAGG TGAGTGTAAA TGGTAAAGCG TTAAGTAATG TGGGAGTTGT GCCGCCTAAA 
AGCCAGCGTC AGACAAGCTG GTGTCAGGCA ATCGCACCGT GTCATGTCGC CTGGCGGGCG 
ATAAATGATT ACGGCGGGTT GAGTGCAAAG AAGGAGCAAA ATCTGCCCTG A 

 

Protein sequence

MTNTWNRLAL LIFAVLSLLV AGELQAGVVV GGTRFIFPAD RESISILLTN TSQESWLINS 
KINRPTRWAG GEASTVPAPL LAAPPLILLK PGTTGTLRLL RTESDILPVD RETLFELSIA 
SVPSGKVENQ SVKVAMRSVF KLFWRPEGLP GDPLEAYQQL RWTRNSQGVQ LTNPTPYYIN 
LIQVSVNGKA LSNVGVVPPK SQRQTSWCQA IAPCHVAWRA INDYGGLSAK KEQNLP