Gene ECD_00943 details

Gene Information

• Locus tag: ECD_00943
• Symbol: ycbR
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 1003579
• End bp: 1004280
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 45%
• Product: predicted periplasmic pilin chaperone
• Protein accession: ACT42838
• Protein GI: 253977168

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.198614
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTT GCATAACAAA GGGAATTGTG ACCGTAAGTT TAACGGCAAT ATTACTCAGC 
TGCTCATCCG CATGGGCGGC AGGTAAAGGC GGGATTGGAC TTGCAGCAAC ACGTCTTGTT 
TATTCAGAAG GTGAAGAGCA AATTTCACTG GGTGTACGTA ACACCAGTCC GGATGTTCCT 
TATCTTATTC AGTCATGGGT GATGACCCCA GATAATAAAA AATCAGCAGA CTTTATTATT 
ACACCACCGC TATTTGTGCT GAATCCGGCA AATGAGAATC TGTTACGCAT TATGTACATT 
GGAGCGCCGT TGGCGAAAGA CAGAGAAACC CTTTTCTTCA CTAGCGTACG GGCAGTCCCT 
TCAACAACGA AGCGGAAAGA GGGAAATACC CTGAAGATTG CCACACAAAG CGTCATCAAA 
CTTTTCTGGC GACCAAAAGG TTTAGCGTAT CCCTTAGGCG AGGCTCCGGC GAAACTGCGT 
TGCACTTCGT CAGCTGACAT GGTTACGGTC AGTAACCCAA CACCTTATTT CATTACCCTG 
ACAGACCTGA AAATAGGTGG AAAAGTAGTT AAAAATCAAA TGATTTCCCC CTTTGATAAA 
TACCAATTTT CTCTGCCAAA GGGGGCCAAA AATAGCAGCG TAACGTATCG AACCATCAAT 
GACTACGGGG CGGAAACGCC GCAACTCAAC TGTAAATCGT AA 

 

Protein sequence

MKTCITKGIV TVSLTAILLS CSSAWAAGKG GIGLAATRLV YSEGEEQISL GVRNTSPDVP 
YLIQSWVMTP DNKKSADFII TPPLFVLNPA NENLLRIMYI GAPLAKDRET LFFTSVRAVP 
STTKRKEGNT LKIATQSVIK LFWRPKGLAY PLGEAPAKLR CTSSADMVTV SNPTPYFITL 
TDLKIGGKVV KNQMISPFDK YQFSLPKGAK NSSVTYRTIN DYGAETPQLN CKS