Gene ECD_00942 details

Gene Information

• Locus tag: ECD_00942
• Symbol: ycbQ
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 1002957
• End bp: 1003496
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 42%
• Product: predicted fimbrial-like adhesin protein
• Protein accession: ACT42837
• Protein GI: 253977167

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.608111
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GTGTATTGAC GGCGTTTATA ACTGTGGTAT GTGCAACGTC CAGCGTTATG 
GCTGCTGATG ATAATGCTAT CACGGATGGC TCAGTAACAT TTAATGGTAA AGTTATTGCT 
CCAGCTTGTA CCCTGGTAGC TGCGACGAAA GATTCCGTGG TGACTTTGCC AGATGTTAGT 
GCCACGAAGT TGCAAACCAA TGGTCAGGTT TCTGGCGTGC AAATTGATGT GCCAATTGAA 
TTAAAAGATT GTGATACTAC CGTAACAAAA AATGCAACGT TCACCTTTAA TGGCACTGCG 
GATACTACTC AGATTACAGC GTTTGCTAAC CAGGCCTCAT CTGATGCTGC TACAAACGTG 
GCCCTGCAAA TGTATATGAA TGATGGTACA ACGGCCATCA CGCCAGACAC AGAAACCGGG 
AACATTTTGT TGCAGGATGG AGATCAGACG TTGACTTTTA AAGTTGATTA TATCGCTACG 
GGGAAAGCGA CTTCAGGTAA TGTGAATGCG GTAACAAATT TCCATATTAA CTATTATTAA 

 

Protein sequence

MKKSVLTAFI TVVCATSSVM AADDNAITDG SVTFNGKVIA PACTLVAATK DSVVTLPDVS 
ATKLQTNGQV SGVQIDVPIE LKDCDTTVTK NATFTFNGTA DTTQITAFAN QASSDAATNV 
ALQMYMNDGT TAITPDTETG NILLQDGDQT LTFKVDYIAT GKATSGNVNA VTNFHINYY