Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00683 |
Symbol | sdhA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 714477 |
End bp | 716243 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | ACT42558 |
Protein GI | 253976888 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGCGG CGCAGGTATG CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAGACCTGTG CGCTGCTCTC TAAAGTCTTC CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC CATGAAGATA ACTGGGAATG GCATATGTAC GACACCGTAA AAGGGTCGGA CTATATCGGT GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA CACATGGGCC TGCCGTTCTC GCGTCTTGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGCA CTGCGGCAGC GGCTGACCGT ACCGGTCACG CACTGTTGCA CACGCTTTAT CAGCAGAACC TGAAAAACCA CACCACCATT TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGTTGT ACCGCACTGT GCATCGAAAC CGGTGAAGTG GTTTATTTCA AAGCCCGCGC TACCGTGCTG GCGACTGGCG GGGCAGGGCG TATTTATCAG TCCACCACTA ACGCCCACAT TAACACTGGC GACGGTGTCG GCATGGCTAT CCGCGCAGGC GTACCGGTGC AGGATATGGA AATGTGGCAA TTCCACCCGA CCGGCATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC AAAGACCTGG CGGGCCGTGA TGTGGTGGCG CGTTCCATCA TGATTGAAAT CCGTGAAGGT CGCGGCTGTG ATGGTCCGTG GGGGCCACAC GCGAAACTGA AACTCGATCA CCTGGGTAAA GAAGTTCTCG AATCCCGTCT GCCGGGTATC CTGGAGCTTT CCCGTACCTT CGCTCACGTT GATCCGGTGA AAGAGCCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGCGGTATT CCGACCAAAG TGACCGGTCA GGCGCTGACT GTGAATGAGA AAGGCGAAGA TGTGGTTGTT CCGGGGCTGT TCGCGGTAGG TGAAATTGCC TGCGTATCGG TACACGGTGC TAACCGTCTG GGCGGTAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGCG CAGCGGGTCT GCATCTGCAA GAGTCTATCG CCGAGCAGGG CGCATTGCGC GATGCCAGCG AGTCTGATGT TGAAGCATCT CTGGATCGTC TGAACCGCTG GAACAATAAT CGTAACGGTG AAGATCCGGT GGCGATTCGT AAAGCGCTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG GCGAAAGGGC TTGAGCAGTT GAAAGTTATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGTC TGGAACTGGA TAACCTGATG GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCGCAT AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG CCAGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA TTCCCGCCGA AGATTCGTAC TTACTAA
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Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY
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