Gene ECD_00679 details

Gene Information

• Locus tag: ECD_00679
• Symbol: ybgD
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 710799
• End bp: 711365
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 47%
• Product: predicted fimbrial-like adhesin protein
• Protein accession: ACT42554
• Protein GI: 253976884

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAG GACAAAAAAC ATTGACCGCT CTGGCCATAT CTCTGCTATT CACTGCACCT 
GTTTATGCAG CTGATGAAGG ATCCGGTGAA ATTCACTTTA AAGGTGAAGT TATTGAAGCA 
CCGTGTGAAA TACATCAGGA TGATATTGAT AAAGAGGTTG AACTCGGTCA GGTGACCACC 
AGCCACATTA ATCAGTCACA TCACAGCGAT GCCGTTGCTG TCGACCTGCG CTTAGTCAAC 
TGTGATCTGG AAAACTCCAG CAACGGTTCC GGTGGCAAGA TTTCTAAAGT TGCAGTCACC 
TTTGATAGCT CAGCGAAAAC CACCGGCGCA GATCCGATTC TCAACAACAC CAGCACGGGT 
GAAGCCACCG GCGTCGGCGT ACGTTTAATG AATAAAGATC AAAGCAATAT CGTTTTAGGC 
ACCGCTACTC CAGATATCGA CCTGGCTCCG ACCTCCAGCG AACAAACGCT GAATTTCTTT 
GCCTGGATGG AACAAATTGA TCAGGCTACA CCTGTAACGC CAGGCGCAGT TACAGCGAAT 
GCGACCTACG TGCTGGATTA TAAATAA 

 

Protein sequence

MFKGQKTLTA LAISLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHQDDID KEVELGQVTT 
SHINQSHHSD AVAVDLRLVN CDLENSSNGS GGKISKVAVT FDSSAKTTGA DPILNNTSTG 
EATGVGVRLM NKDQSNIVLG TATPDIDLAP TSSEQTLNFF AWMEQIDQAT PVTPGAVTAN 
ATYVLDYK