| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00604 |
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| Symbol | mrdA |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 626679 |
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| End bp | 628580 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) |
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| Protein accession | ACT42482 |
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| Protein GI | 253976812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0219544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAC AGAACTCTTT TCGCGACTAT ACGGCAGAGT CCGCGCTGTT TGTGCGCCGG
GCGCTGGTCG CCTTTTTGGG GATTTTGCTG CTGACCGGCG TGCTTATCGC CAACCTGTAT
AATCTGCAAA TTGTTCGCTT TACCGACTAC CAGACCCGCT CTAATGAAAA CCGCATTAAG
CTGGTGCCTA TCGCGCCCAG CCGCGGCATT ATCTATGACC GTAACGGTAT CCCTCTGGCA
CTCAACCGCA CTATCTACCA GATAGAAATG ATGCCGGAGA AAGTCGATAA CGTGCAGCAA
ACGCTGGACG CTTTGCGCAG CGTGGTTGAT CTGACCGATG ACGATATTGC TGCATTCCGA
AAAGAGCGCG CACGTTCACA CCGTTTCACC TCTATTCCGG TGAAAACTAA CCTGACCGAA
GTACAAGTAG CTCGCTTTGC CGTCAATCAG TACCGTTTTC CGGGTGTTGA AGTTAAAGGC
TATAAACGTC GTTACTATCC TTACGGTTCG GCGTTGACCC ACGTCATCGG CTATGTGTCG
AAAATCAACG ATAAAGACGT CGAACGCCTG AATAATGACG GCAAACTGGC CAACTATGCG
GCAACGCATG ATATCGGTAA GCTGGGCATT GAGCGTTACT ATGAAGATGT GCTGCACGGT
CAGACCGGTT ATGAAGAGGT TGAAGTTAAC AACCGTGGGC GTGTTATTCG CCAGTTAAAA
GAAGTACCAC CGCAAGCCGG ACACGATATT TACCTGACGC TGGATCTCAA ACTCCAGCAA
TATATTGAAA CGCTGCTGGC GGGTAGCCGC GCAGCTGTGG TAGTCACCGA TCCGCGTACA
GGTGGGGTGC TGGCGCTGGT TTCCACGCCT AGTTATGACC CAAACTTGTT TGTTGACGGT
ATCTCCAGCA AAGATTATTC CGCCTTGTTG AACGACCCGA ATACACCGCT GGTGAACCGC
GCCACACAGG GGGTTTATCC TCCCGCGTCT ACAGTTAAAC CCTATGTGGC GGTTTCGGCA
TTGAGCGCCG GGGTGATCAC GCGCAATACG ACGCTGTTTG ACCCAGGCTG GTGGCAACTG
CCAGGTTCGG AAAAACGTTA TCGTGACTGG AAAAAATGGG GCCACGGGCG TCTGAATGTC
ACAAGATCGC TGGAAGAATC TGCGGATACC TTCTTCTATC AGGTGGCCTA CGATATGGGG
ATCGATCGCC TCTCCGAATG GATGGGTAAA TTCGGTTATG GTCATTACAC CGGTATCGAC
CTGGCGGAAG AACGTTCCGG CAACATGCCT ACCCGCGAAT GGAAACAGAA ACGCTTTAAA
AAACCGTGGT ATCAGGGTGA CACCATTCCG GTTGGTATCG GTCAGGGTTA CTGGACAGCG
ACCCCAATCC AGATGAGTAA GGCACTGATG ATCCTGATTA ATGACGGTAT CGTGAAGGTT
CCGCATTTGC TGATGAGCAC CGCCGAAGAC GGCAAACAGG TGCCATGGGT ACAACCGCAT
GAACCGCCCG TCGGCGATAT TCATTCCGGT TACTGGGAGC TGGCGAAAGA CGGTATGTAC
GGTGTTGCTA ACCGCCCTAA CGGTACGGCG CATAAATACT TTGCCAGCGC ACCGTACAAA
ATTGCGGCGA AATCTGGTAC CGCTCAGGTC TTCGGTCTGA AAGCGAACGA AACCTATAAT
GCGCACAAAA TTGCCGAGCG TTTACGTGAC CACAAACTGA TGACCGCCTT TGCGCCATAC
AACAATCCGC AAGTGGCTGT CGCCATGATT CTGGAGAACG GCGGCGCGGG TCCGGCGGTT
GGTACGCTGA TGCGCCAGAT CCTCGACCAC ATTATGCTGG GTGATAACAA CACCGATCTG
CCTGCGGAAA ATCCAGCGGT TGCCGCAGCG GAGGACCATT AA
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| Protein sequence | MKLQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQIVRFTDY QTRSNENRIK
LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LTDDDIAAFR
KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS
KINDKDVERL NNDGKLANYA ATHDIGKLGI ERYYEDVLHG QTGYEEVEVN NRGRVIRQLK
EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVVVTDPRT GGVLALVSTP SYDPNLFVDG
ISSKDYSALL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT TLFDPGWWQL
PGSEKRYRDW KKWGHGRLNV TRSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID
LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGIVKV
PHLLMSTAED GKQVPWVQPH EPPVGDIHSG YWELAKDGMY GVANRPNGTA HKYFASAPYK
IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAMI LENGGAGPAV
GTLMRQILDH IMLGDNNTDL PAENPAVAAA EDH
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