Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00577 |
Symbol | ybdR |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 601918 |
End bp | 603156 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | predicted oxidoreductase, Zn-dependent and NAD(P)-binding |
Protein accession | ACT42455 |
Protein GI | 253976785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAT TGACTTATCA CGGCCCACAT CACGTTCAGG TAGAAAATGT TCCCGATCCG GGCATTGAAC AGGCAGATGA TATTATTCTG CGTATTACGG CAACGGCGAT CTGTGGCTCT GACCTCCATC TTTATCGAGG CAAAATACCC CAGGTTAAAC ATGGCGATAT TTTTGGTCAT GAATTTATGG GGGAAGTCGT TGAAACCGGA AAGGACGTAA AAAATTTGCA AAAAGGCGAC CGGGTGGTAA TTCCGTTTGT CATTGCTTGT GGCGACTGTT TTTTCTGTCG ATTACAGCAA TATGCCGCCT GCGAAAATAC CAATGCGGGT AAAGGCGCTG CGCTCAATAA AAAACAGATA CCAGCTCCCG CGGCATTGTT TGGTTATAGT CACCTGTATG GCGGCGTTCC TGGTGGGCAG GCGGAATATG TCCGCGTCCC TAAAGGGAAT GTGGGGCCGT TTAAAGTACC GCCTTTGCTT TCAGATGATA AAGCGCTTTT CCTTTCTGAT ATTCTGCCAA CGGCATGGCA GGCAGCAAAA AATGCGCAGA TCCAACAAGG TTCAAGCGTT GCAGTCTATG GTGCTGGTCC TGTGGGATTG TTGACAATCG CCTGTGCACG GTTGCTCGGT GCGGAACAGA TTTTTGTTGT TGATCATCAT CCCTACCGCT TGCATTTCGC CGCCGACCGC TACGGCGCGA TCCCGATTAA TTTTGATGAA GACAGCGATC CGGCACAGTC AATTATTGAA CAAACGGCAG GTCACCGGGG CGTGGATGCA GTAATAGACG CCGTCGGTTT TGAAGCGAAA GGCAGCACCA CGGAAACGGT GCTGACTAAC CTGAAACTGG AGGGCAGCAG CGGTAAAGCG TTGCGTCAGT GTATTGCGGC GGTCAGGCGT GGCGGCATTG TTAGCGTACC GGGCGTCTAC GCTGGATTTA TTCACGGTTT CCTGTTTGGC GACGCCTTTG ATAAAGGGTT GTCGTTTAAA ATGGGACAGA CCCACGTTCA CGCATGGCTG GGAGAATTAT TACCGTTAAT TGAGAAAGGA TTACTGAAAC CAGAAGAAAT TGTTACCCAC TATATGCCGT TTGAAGAGGC CGCCCGGGGA TATGAGATTT TCGAAAAACG TGAAGAGGAG TGCCGTAAGG TGATTCTGGT ACCCGGTGCA CAAAGCGCAG AGGCGGCGCA GAAGGCGGTT TCAGGTCTAG TGAATGCGAT GCCGGGGGGA ACAATATGA
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Protein sequence | MKALTYHGPH HVQVENVPDP GIEQADDIIL RITATAICGS DLHLYRGKIP QVKHGDIFGH EFMGEVVETG KDVKNLQKGD RVVIPFVIAC GDCFFCRLQQ YAACENTNAG KGAALNKKQI PAPAALFGYS HLYGGVPGGQ AEYVRVPKGN VGPFKVPPLL SDDKALFLSD ILPTAWQAAK NAQIQQGSSV AVYGAGPVGL LTIACARLLG AEQIFVVDHH PYRLHFAADR YGAIPINFDE DSDPAQSIIE QTAGHRGVDA VIDAVGFEAK GSTTETVLTN LKLEGSSGKA LRQCIAAVRR GGIVSVPGVY AGFIHGFLFG DAFDKGLSFK MGQTHVHAWL GELLPLIEKG LLKPEEIVTH YMPFEEAARG YEIFEKREEE CRKVILVPGA QSAEAAQKAV SGLVNAMPGG TI
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